Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3520 |
Symbol | |
ID | 3966362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4474633 |
End bp | 4475604 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637922617 |
Product | cell wall biosynthesis glycosyltransferase-like protein |
Protein accession | YP_528987 |
Protein GI | 90023160 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTACG ATATTTCTAT CATTATTCCC GCGTATAACG TGGAGCAACA TATTCAAAAA TGCTTGGTTA GCATTTTTGA ACAAGAATTT AATGGCAGTG TAGAAGTAAT CGTTATTGAT GACTGTTCAA GCGATAACAC CCTTGCCATA GCTGAATCTA CACTTTGCAG CCGCCCGCAC TGTAAATTAA TTCGCCATAA CACCAACCAA GGCTGTTCGA GCGCGCGCAA TAGTGGGTTG GACGTTGCGA CAGGCACCTA CATTACCTTT GTAGACCCCG ACGACAGCCT GCCAGCAGGG GCACTACAAG CGCTATATAA CGCCGCAGTT GAGCACGACG CAGATATCGT GAAGGGCAAT CACTTCGTTA TCAACAGCAA AGGCGCATGC AAAGCCAATC AAAACACCCT TAAAAAGAAG CGCATTTTTA ACCAAGCCGT ATACACCTCT TTACTTGCCC ACAAACAAGT AAGAGGCCAT GTGTGGGGCA AGCTATTTAA ACGCACTGCC ATAGGCAATA CTCGTTTTAA AAATGGCGTA AGAATGGCCG AAGATTTACT TTTTTGCGCA GAGGTATTTG CCAAAGCAAA CGCGTTAACA ATTATTCCCA ATAATGTGTA CACCTATCAC CTGCACGGCA CCGGTGCCAC GGGTAAAAAG TTTATCACCA ACGCCTATTT AGACTGGATA GAAAGCGTAA CAGCCTGTAA AAATTTTATT ACCCACAAGA GCCAACTGCC CGCATTTAAC TCGCTGGTTG TGCGCTCGTT GTTACAGCTA GCCCGCGAAG CCCGTGCGCA AAATACCGAT AAAAAACGGG AAGTGCTGGC ATATTTAAAT GAAAAAATAG ATAGCGCTCA TGTGTGCGGT AAATATTTAT TGTCGAACGC CCCATCAGAC GTTAAAACCC TTGTGCGATA CATAAAACTT AAGCGTTTGA AACGAGCCCT ATATACCAAG CAAAGTGCTT AA
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Protein sequence | MNYDISIIIP AYNVEQHIQK CLVSIFEQEF NGSVEVIVID DCSSDNTLAI AESTLCSRPH CKLIRHNTNQ GCSSARNSGL DVATGTYITF VDPDDSLPAG ALQALYNAAV EHDADIVKGN HFVINSKGAC KANQNTLKKK RIFNQAVYTS LLAHKQVRGH VWGKLFKRTA IGNTRFKNGV RMAEDLLFCA EVFAKANALT IIPNNVYTYH LHGTGATGKK FITNAYLDWI ESVTACKNFI THKSQLPAFN SLVVRSLLQL AREARAQNTD KKREVLAYLN EKIDSAHVCG KYLLSNAPSD VKTLVRYIKL KRLKRALYTK QSA
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