| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3411 |
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| Symbol | |
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| ID | 3966137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 4345533 |
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| End bp | 4346180 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637922508 |
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| Product | DNA-directed DNA polymerase |
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| Protein accession | YP_528878 |
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| Protein GI | 90023051 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.537666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0817359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCT TGGGGAATAA AAATGTACCA TTAGCCAATA GCGTAGTTGT ACTCGATTTT
GAAACAACAG GGTTATCTCC CGATATGGGA GATAGAGCAA TAGAAATAGG CGCGGTGCGT
TTGCACAATG GCGAAATTGT CGATCGCTTT CAGGCCTTGA TGAACCCCGG CTTCCAAATA
TCAGGTTTTA TTGCCAGTTA TACGGGTATA GATAACAGCA TGCTCGCCAA AGCGCCGCCG
TGTGATGAGG TGATGGATGC ATTCGCCAAT TACATTGGTA ATGATAATCT TGTGGCTCAT
AACGCTTCGT TCGATAAGCG TTTTTTAGAT GCCGAGCTGT ACCGTATTGG ACGCAGCTAT
AGTGGTGACT TTACTTGTTC GCTATTGGCC GCCAGGCGCT TATTTCCCAA TGCGGAAAAC
CATAAATTGG GTACACTGGT AAAACACACC AAGTTACAAA GCGATGGTGC ATTTCACCGG
GCGCTGTACG ATTCTGAAAT GACGGCCAAA GTGTGGATGG TTATGTTAAT GCAGTTACAG
CAAGCCTACG GCTTAAACCA TGTGCCGTTT TCGCTTATTC AAAAAATAAC TAAAACGCCT
AAAAAGTCGG TGCATGGCCT GTTAGAAAAA TTTGTAGCAA AGCAATAA
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| Protein sequence | MSALGNKNVP LANSVVVLDF ETTGLSPDMG DRAIEIGAVR LHNGEIVDRF QALMNPGFQI
SGFIASYTGI DNSMLAKAPP CDEVMDAFAN YIGNDNLVAH NASFDKRFLD AELYRIGRSY
SGDFTCSLLA ARRLFPNAEN HKLGTLVKHT KLQSDGAFHR ALYDSEMTAK VWMVMLMQLQ
QAYGLNHVPF SLIQKITKTP KKSVHGLLEK FVAKQ
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