| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3112 |
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| Symbol | |
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| ID | 3965512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3975225 |
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| End bp | 3978314 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922209 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_528581 |
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| Protein GI | 90022754 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACAAC CTGTTGTTTT ACTTAAATAC ATTTACGCTG ATACAACTAA GAGATGGTAT
ATGCTTTTTC TGAAAAACCT CCCCCTTGTT AAAAAATTGG TTTTAGTCTT TTTATTGGTT
GGCTTAATAC CCATGGCGCT CACTGTTCTT CTGGCGATTA ACTCATCCAA GCAAACAATA
ACCGATCTCG TATCAAATCA GCTAAGCGCG GTAAGGCAAA ATAAAGAGGA GAGCATCCAA
CGCTACTTTC AACGCGTTAG AAAGCAAGCC AGCACATTGG CCGCCGACCC CATTGTGGTG
GATGTTGCAA CCAAACTGCC AATGGCCTTT AAAAGCTTTC GAGCAGATGC CAGCATAAAT
GAAGCGCTGC TCACTCAACA AAAAGCCGCT GTGGTGGACT ATTACAACTC GCAGTTTGCT
AAGCAATACC AGAAAGTTAA CAATAGCCAA GTTAATTTAG CTGCCATGTA CAACAGCCTT
GACGACGATT CTTGGGCGCT ACAATATGCT TACATAGCCA GCAACCCCAA CCCACTAGGT
AGCAAACATT TACTCATCAA CCGCAATGAC GGCACCCGCT ACTCAGCGTT ACACCATCAA
GTGCACCCTC TGCTTAAGCA TTACTTAGAA ACATTCGGTT ATTACGATAT TTTTATCGCC
GACCCCGTAA GTGGCGACAT AATATATTCC GTTTTCAAGG AGCTAGACTT CACCACCTCA
ATGCTCGACG GCCCCTATCG AGAAACTAGC ATAGGGGAAG CATTTAATAA TTCACTGAAT
AAACAACCAG AAACAACTTA CCTAGCAGAT TTTAAAACCT ACTTACCATC CTACGATTCG
CCAGCCAGTT TTATCTCTAC ACCAATCTAT AGTGATGGCC AATTAGTGGG CATACTCATT
TTTCAAATGC CCATTGAAGA TATTAATGAC ATTATGAGCT CGCGTACTGG AATGGGCCAA
ACAGGGGAAA CCTATCTCGT TGGCTCAGAC AAACTTATGC GCTCCGACTC TTTCTTAGAC
CCCGTTCACC ACACAGTAGT TAACTCTTTT AAACACCCTC AACAAGGCAG TGTAAATACA
CGTTCGGTAA CGCAAGCTTT GCAGGGAAAA AGCAAAACAG ATTTTATTGT TGATTACAAT
GGCAACCCCG TAATCTCATC CTACAATGCT ATCGATTTAA GTGAATTTAA ATGGATAGCA
ATTGCCGAGC AAGATGTCGC AGAAGCGATG GCACCTCTAA ATCGGCTCCA ACGCAATATA
TTACTCGTGG GTTTATTTAT AACGTGCGTT GTAGTTTTTG CGGGTTTTGC CATTAGCAAA
GGTATTGCTC GCCCCATTAA CGACATGGCT GCAGTTATTA AACGCGTGCA GCAAAGCGGC
GATTTTAGCC TGCGCAGTAA CTACCGCAGC AAAGATGAAA CTGGCCAAAT GGCGATAGCG
TTCGACGGGT TGCTAAATAC CTTGTCTACT ATGTTTTCCG ATACTAACCA AATACTTAAA
AACGTTGCCA ACGGAAACTT CGACGAAGCG ATTAAGCAAC GCTATAACGG CGACATGGGT
ATATTAAGCC TGCGCGTTAA CAATACCATT CAGCAAATTA AGCAAGCCAA CTTAGAGCAA
AAAAAGCAAC AAGCCCGCGC CGAACAAGCG TCCAAAAACG CAGAGCAAGC TGCGCACGAT
GCTCAAGCGG CAGCAGATCG AGCAAACAAT ATAAAACAAG CTTTGGATGT AACAAGCACA
TCGGTAATGA TGGCTGATAA ATCCAACACC ATTGTGTACA CCAATACAGC ATTAGATCAA
ATGATGCTTG CTAGTGAGGC AGATATTCGT GCAGTGCTAC CTAACTTTAA TGCCGATACC
TTAGTTGGCA AAAATATGGA TACATTTCAC CGCAACCCAG CCCATCAACA AAGTGTTATT
AGCCAGTTAA AAAGTACTTA CTCCACTCAA ATTAAAGTGG GTACCCGCAC TTTTAGCCTT
ATAGCCAACC CCATAACTAA AGATGGCGAG CGTGTAGGTA CAGTGGTGGA ATGGAAAGAT
AGAACAGAAG AGGTGACCGT AGAAAACGAG ATTGCCCACT TAGTTAACGC GGCGTCGAAC
GGTGACTTTA GCACGAAGAT AGCTTTGGAT GGCAAACAGG GCTTTTTCTT GGTGCTGGCG
CAAAACCTAA ATGAAATGGT CACCACCACC CACAGTGCTT TACGCGATAT AAGCGATGCA
GTAGAAAACT TGGCTCACGG CGACTTAACT CGTCGCTTAG AAAGCGATCA CAAAGGCATG
TTTGCCCAGC TTCAAAATAA TTTAAACAGT TCTATGGATA AATTGGTAAC CATTATTGGC
GAGATAACTG AGGGAGCAGT GTCTATTCGC AACGGGTCTA GCGAAATAGA GGCAGGTATT
ATTGATTTAA GCTCTCGCAC CGAAGAGCAA GCCGCGTCGC TTGAAGAAAC TGCAAGCAGC
ATGAATCAAA TGACCTCGAC TATTAAACAC AGCGAACAAA ATGCAGCCCT CGCAAATAAC
CTTTCTGCTG AAGCGCAGGC AAAAGCCAGC GAGGGCGGGC TAGTAGTGAA GAAAGCCGTG
GAGGCAATGG AGTCGATTAG CAGTGCCAGT AGCCGCATAT CCGATATTAT TGGCGTTATC
GATGAGATTG CTTTTCAAAC AAACCTACTA GCTATTAACG CCGCCGTAGA AGCAGCACGT
GCTGGTGAGC AGGGCCGTGG CTTTGCCGTA GTGGCAACCG AAGTTCGCCA GCTTGCGCAA
CGATCTTCTA ATGCGGCCAA AGAAATAAAA ACGCTTATTA ACGATAGCGC CGCACGTGTG
GAGCAAGGCT CTGCCCTAGT TAACCAATCT GGTGCGACCC TGCGAGATAT TGTTGAGTCG
GTAAATAAAG TAAATGAAAC CATAATGGGT ATTGCAAGCG CCGCGCGCGA GCAAAGTGAA
GGTATTAATC AAGTTAATAT TGCCATCAAC CAAATGGATG AAATGACCCA ACAAAATTCT
GCACTCGTAG AACAAGCAAA CGCTGCCAGC CAAAATATGG CCGCGCAATC GCGCACAATG
GCAGAGGCTG TAACTTTCTT TAAACTATGA
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| Protein sequence | MLQPVVLLKY IYADTTKRWY MLFLKNLPLV KKLVLVFLLV GLIPMALTVL LAINSSKQTI
TDLVSNQLSA VRQNKEESIQ RYFQRVRKQA STLAADPIVV DVATKLPMAF KSFRADASIN
EALLTQQKAA VVDYYNSQFA KQYQKVNNSQ VNLAAMYNSL DDDSWALQYA YIASNPNPLG
SKHLLINRND GTRYSALHHQ VHPLLKHYLE TFGYYDIFIA DPVSGDIIYS VFKELDFTTS
MLDGPYRETS IGEAFNNSLN KQPETTYLAD FKTYLPSYDS PASFISTPIY SDGQLVGILI
FQMPIEDIND IMSSRTGMGQ TGETYLVGSD KLMRSDSFLD PVHHTVVNSF KHPQQGSVNT
RSVTQALQGK SKTDFIVDYN GNPVISSYNA IDLSEFKWIA IAEQDVAEAM APLNRLQRNI
LLVGLFITCV VVFAGFAISK GIARPINDMA AVIKRVQQSG DFSLRSNYRS KDETGQMAIA
FDGLLNTLST MFSDTNQILK NVANGNFDEA IKQRYNGDMG ILSLRVNNTI QQIKQANLEQ
KKQQARAEQA SKNAEQAAHD AQAAADRANN IKQALDVTST SVMMADKSNT IVYTNTALDQ
MMLASEADIR AVLPNFNADT LVGKNMDTFH RNPAHQQSVI SQLKSTYSTQ IKVGTRTFSL
IANPITKDGE RVGTVVEWKD RTEEVTVENE IAHLVNAASN GDFSTKIALD GKQGFFLVLA
QNLNEMVTTT HSALRDISDA VENLAHGDLT RRLESDHKGM FAQLQNNLNS SMDKLVTIIG
EITEGAVSIR NGSSEIEAGI IDLSSRTEEQ AASLEETASS MNQMTSTIKH SEQNAALANN
LSAEAQAKAS EGGLVVKKAV EAMESISSAS SRISDIIGVI DEIAFQTNLL AINAAVEAAR
AGEQGRGFAV VATEVRQLAQ RSSNAAKEIK TLINDSAARV EQGSALVNQS GATLRDIVES
VNKVNETIMG IASAAREQSE GINQVNIAIN QMDEMTQQNS ALVEQANAAS QNMAAQSRTM
AEAVTFFKL
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