Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2602 |
Symbol | glnD |
ID | 3968595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3299450 |
End bp | 3302152 |
Gene Length | 2703 bp |
Protein Length | 900 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637921700 |
Product | PII uridylyl-transferase |
Protein accession | YP_528074 |
Protein GI | 90022247 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAAC CCGCTGCTCG TCAGTTCCCT CAGGTAGCCA CCCAACCTAT CTTTTTTAAT CAGGCTCGTT TTCGTGAAAA CCTCGCAAAC AAGCCGCCAG TGGTGGTATT TAAAGATGCA ATAGCGGGTG TGAACCAACA GTTTGACCAA CGCTTTTTAG AGGGCGAAGA TATTCGCCAC CTTATTCACG AGCGCGCACA ATTTATAGAT TTAATACTGC ATTACGCGTG GCACCATTTT GACTGGGGCG ATGATATATC ACTCATCGCC GTTGGCGGAT ACGGCCGCGG CGAGCTGCAC CCCCATTCAG ATATCGACAT ACTCATATTA CTCGATAACA AGGTTGGTAC CGAGTACAAC GAAACGCTGC AATCTTTTGT CACCATGCTG TGGGATATAG GCCTAGACAT AGGCTCCAGC GTGCGCACCT TGCAAGAATG CATAGATATA GCCCGCGAAG ACATTACCGT AGCAACCAAC CTTATAGAAG CGCGCCGCAT TGCCGGCAAC GACAGCCTGC GCGACCAATT ACAAATACTT ACCGATGCTA AACACATGTG GCCCATTCGC GATTTTTATC AAGCGAAATG GGAAGAGCAA GAAAAGCGCC ACGAAAAACA CAACAATACC GAGTACAACC TAGAACCCAA CATTAAAAAC GCGCCGGGCG GCCTGCGCGA TATACAAATG ATTAACTGGG TTGCCAAACG CTACTTCCAA GTGCAAACCC TTTTGCAACT GCAAGGGCAA GACTTTTTTA CCGAACACGA ATTCGGTATT TTGCGTCGCG GCGAAGAGTT TTTATGGCGC GTGCGCTACG GTGTACATAT GCTCGCAGGC CGCGCCGAAG AGCGCCTACT GTTTGAATAC CAGCGCGAAC TCGCCACTAT TTTTGGCTTT CAAGAAAACG ACAAACGTTT AGCCGTCGAA CAATTTATGC ACCAATACTA TAAAACGGTA TTGGCACTGC GCGAATTAAA CGATGTGCTG CTGCAGTATT TGCAAGAAAC TATCGAAGAA AAAGTGGCAC CAACTATTGT GCCCATCAAT GAACGCTTTC AGCTTTGCGA TGGCTTTATC GAGGTTATCC ACCGCGATGT ATTTGACCAA ACCCCCAATG CATTGTTGGA AATATTTGTG CTTATGGGGC AAGACCCAAG CATAAAAGGT GTACGCGCAG AAACCATTCG CCTTATTCGC GAGCGCCGCT GGTTAATAGA TGAATCATTT AGAAAAGATC CAGAAAACAA CCGCATGTTT ATGCAATTGT TTCAGCTGGA TTACGGCCTA ATATCGCAAT TAAAGCGCAT GAAGCGCTAC GGTATACTCG GTCGCTACCT ACCCGAGTTT GGCAAAATTA CCGGCCAAAT GCAGCACGAC CTATTCCACC GCTACACAGT GGATGCGCAC ACACTGCTAG TCATTAAAAA TATTCGCCGC TTTCGCTACC CGGATGAGAA AAAGCAGTTC CCTATTGCCG CCCACATTAT GAAGCGCATG GAAAAACCAG AGCTTTTGTA TATTGCCGGC CTGTACCACG ATATAGGCAA AGGCCGCGGC GGCGACCACT CTCAGCTTGG CGCTGTAGAC GCCGCAGCAT TTTGCCAGCA ACACGGTTTT AGCGCGCGCG AAACACGTTT AGTAGTGTGG CTGGTAGAAA AGCATTTGCT CATGTCTTAT GTATCGCAAA AGCAGGATAT TTCAGACCCA GAAGTCATTC ATAACTTCGC ACTGCAAGTG GGTGATCGCC TGCACTTAGA CTACCTCTAC GCGCTAACCG TTGCCGATAT GTGCGGCACC AACCCAGAGG TGTGGAACAC TTGGCGCGCA AGTTTAATGC GTCAACTTTA CTTAGAAACC AAACGCGCAC TGCGCCGCGG CTTAGAAAAC ACCATCGATC AAAACGAGCT AATTGAAGAA ACTCAACAGC TTGCTCTGGC CAAACTTGCA GATAAAAACA TTTGCGAAAA TCAGGCGCGC GCAATTTGGT CGGTAATGGG CGATGAGTAT TTCGTGCGCG AAGGGCACAT TGATATTGCC TGGCAAACCG AAGCGATTGT TACCAACCCA AGCGACGAAA ACCTCGTGCT TATTCGTGAA ACCACCAGCC ACGAATTTGA AGGCGCCACC CAAATTTTTG TTCGCGTTAA AGATGCGCCC CACGTATTTA CCGCCGTAGC CAATGCCCTA GCTCAACAAA ACCTAAACAT TCAAGATGCC AGAGTTTACA GCGCCGCCAA CGGCTACACC GCCGACACCT TCTATGTGCT AGACGACAAC TTCCAACCGA TTGGGGACGA CCCCGCCCGC AGTGAAAAAA TTCGCGAATC GGTTTTAGAA GAGTTGCGCC TAGTAAGCGG TTATCGCGAT GTAGTAAGTC GCCGCACTCC AAGGCAGTTA AAACAGTTTG CCGTACCCAC GCGTACTTAC ATTAGCAACG ACATAGTATC TGGCCATACC GTACTAGAAG TAATTAGCCC AGACCGCCCC GGCCTACTCG CCACCATTGG TCGAGTATTT ATGGATATGG ACATCCAATT GCAAAACGCA AAAATTTCCA CCTTGGGCGA GCGCGTAGAA GATATATTTT TCATATCAGA CATAGAGGGC AACCCGCTAA GCGACCCCAA CCTATGCGCA GAATTGCAAA AAGAAATATG TAAGCAGCTC GACCTTAGAG TAGAAAAAGA TTTGGCTCGA TAA
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Protein sequence | MSQPAARQFP QVATQPIFFN QARFRENLAN KPPVVVFKDA IAGVNQQFDQ RFLEGEDIRH LIHERAQFID LILHYAWHHF DWGDDISLIA VGGYGRGELH PHSDIDILIL LDNKVGTEYN ETLQSFVTML WDIGLDIGSS VRTLQECIDI AREDITVATN LIEARRIAGN DSLRDQLQIL TDAKHMWPIR DFYQAKWEEQ EKRHEKHNNT EYNLEPNIKN APGGLRDIQM INWVAKRYFQ VQTLLQLQGQ DFFTEHEFGI LRRGEEFLWR VRYGVHMLAG RAEERLLFEY QRELATIFGF QENDKRLAVE QFMHQYYKTV LALRELNDVL LQYLQETIEE KVAPTIVPIN ERFQLCDGFI EVIHRDVFDQ TPNALLEIFV LMGQDPSIKG VRAETIRLIR ERRWLIDESF RKDPENNRMF MQLFQLDYGL ISQLKRMKRY GILGRYLPEF GKITGQMQHD LFHRYTVDAH TLLVIKNIRR FRYPDEKKQF PIAAHIMKRM EKPELLYIAG LYHDIGKGRG GDHSQLGAVD AAAFCQQHGF SARETRLVVW LVEKHLLMSY VSQKQDISDP EVIHNFALQV GDRLHLDYLY ALTVADMCGT NPEVWNTWRA SLMRQLYLET KRALRRGLEN TIDQNELIEE TQQLALAKLA DKNICENQAR AIWSVMGDEY FVREGHIDIA WQTEAIVTNP SDENLVLIRE TTSHEFEGAT QIFVRVKDAP HVFTAVANAL AQQNLNIQDA RVYSAANGYT ADTFYVLDDN FQPIGDDPAR SEKIRESVLE ELRLVSGYRD VVSRRTPRQL KQFAVPTRTY ISNDIVSGHT VLEVISPDRP GLLATIGRVF MDMDIQLQNA KISTLGERVE DIFFISDIEG NPLSDPNLCA ELQKEICKQL DLRVEKDLAR
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