Gene Sde_2480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2480 
Symbol 
ID3968557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3133535 
End bp3134092 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content43% 
IMG OID637921571 
ProductAcyl-CoA hydrolase-like 
Protein accessionYP_527952 
Protein GI90022125 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT ACCGCTCAGT TAAATCGTCT CAAATTGTCC TTAAAGAATT AATGATTCCC 
TCCTACTCCA ACTTTGGCGG CAAGGTGCAC GGTGGCATTA TCTTGTCGTT AATGGATAAA
ATTGCCTATA CCGCTGCTGC TAGTCACTCG CGCAGCTATT GCGTTACGGC TTCGGTAGAC
TCGGTTAACT TTTTGAACCC CGTTGAAGTG GGCGAATTAG TTACCCTCTT GGCCTCGGTA
AACTATGTGG GCCGGTCATC CATGGAAGTG GGCATAAAGG TTTTTTCAGA AGACTTTAAA
AAAGGTGTTA ACAAACACAC CAACACTTCG TATTTCACCA TGGTGGCAGT AGACGAACAC
ACGCGTAAGC CTGCCCCAGT GCCAGGCTTA ATATTGGAAG AAGAGATAGA AGTTAAACGC
TTTATTTGGG GGAAGTTTCG CAAAAAATAT AGAGGTGAAT ACAAAGAGCA GTTCAAAACA
CTGCGCAGAA ATTTAGATAT AGCCTGCGAA ACGGCATTGT TGCACGAAGA AAATTGTAAA
ATTGCCACAG GTAAATAA
 
Protein sequence
MTEYRSVKSS QIVLKELMIP SYSNFGGKVH GGIILSLMDK IAYTAAASHS RSYCVTASVD 
SVNFLNPVEV GELVTLLASV NYVGRSSMEV GIKVFSEDFK KGVNKHTNTS YFTMVAVDEH
TRKPAPVPGL ILEEEIEVKR FIWGKFRKKY RGEYKEQFKT LRRNLDIACE TALLHEENCK
IATGK