Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2480 |
Symbol | |
ID | 3968557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 3133535 |
End bp | 3134092 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637921571 |
Product | Acyl-CoA hydrolase-like |
Protein accession | YP_527952 |
Protein GI | 90022125 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAT ACCGCTCAGT TAAATCGTCT CAAATTGTCC TTAAAGAATT AATGATTCCC TCCTACTCCA ACTTTGGCGG CAAGGTGCAC GGTGGCATTA TCTTGTCGTT AATGGATAAA ATTGCCTATA CCGCTGCTGC TAGTCACTCG CGCAGCTATT GCGTTACGGC TTCGGTAGAC TCGGTTAACT TTTTGAACCC CGTTGAAGTG GGCGAATTAG TTACCCTCTT GGCCTCGGTA AACTATGTGG GCCGGTCATC CATGGAAGTG GGCATAAAGG TTTTTTCAGA AGACTTTAAA AAAGGTGTTA ACAAACACAC CAACACTTCG TATTTCACCA TGGTGGCAGT AGACGAACAC ACGCGTAAGC CTGCCCCAGT GCCAGGCTTA ATATTGGAAG AAGAGATAGA AGTTAAACGC TTTATTTGGG GGAAGTTTCG CAAAAAATAT AGAGGTGAAT ACAAAGAGCA GTTCAAAACA CTGCGCAGAA ATTTAGATAT AGCCTGCGAA ACGGCATTGT TGCACGAAGA AAATTGTAAA ATTGCCACAG GTAAATAA
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Protein sequence | MTEYRSVKSS QIVLKELMIP SYSNFGGKVH GGIILSLMDK IAYTAAASHS RSYCVTASVD SVNFLNPVEV GELVTLLASV NYVGRSSMEV GIKVFSEDFK KGVNKHTNTS YFTMVAVDEH TRKPAPVPGL ILEEEIEVKR FIWGKFRKKY RGEYKEQFKT LRRNLDIACE TALLHEENCK IATGK
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