| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1958 |
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| Symbol | |
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| ID | 3967123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2463117 |
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| End bp | 2464385 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637921046 |
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| Product | aconitate hydratase 1 |
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| Protein accession | YP_527430 |
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| Protein GI | 90021603 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0713794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.321859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGATT CCATTCTCTA CAGGTGTAGA CGCACCTGGC TGTGGCTTGC GTTTTTACTC
TGCAGTTCGA CACCGGCTCT AGGTGCAGAA AACGCCGACA CACTGACGTT AAAAAAAGCG
TTGGCACTAA CGCTGACGCA CAACCCTCAA CTTTACCAAT ACCGTTTTTC CAACGAGGCG
CTGAACGCCC AGCGGCAGAC CAACGCCTTG CGCCCAGCGT TAGCACTAGA GCTGGAGGTC
GAAAACTTTG CCGGTTCGGG CAGTAACCAA GGCCTTGATG CGGCGGAAAC CACGCTGGCG
TTGTCTTCAG CGATCGAGCT GGGCGGAAAA CGCCAGGCAC GCCTTTCTTA TGCGGATGCC
CGCATAAACC AGGTGGAGTG GGAGCAGCAA GCCGCGACCC TCGACGTGCT CGGAGCATTA
ACCGAGGTAT ACATCGAAGG GCTGGCGACG CAGGCCAACA TTCAATTGGC CGAAGAATCT
TTGACCTTAT CCCAATCACT GCTGAAGACA GTGAAAACAC GGTCTGCACG AGGCGCCACA
CCGGAAGCGG AAGTGATGCG AGCCCAAGCA GCGCTCACTC GTGCAGAGAT CCGACTCGCT
GCACTACAAG AGCAGTTTGA ACGTCACAAA GTGCAGCTCG TAAGATTCTG GGGAGAAACC
ACCGCAAATT TTGCCACGCT GGAAGGCAGT CTTTATAACT TTGCGGCTAC TAACAGTTTT
AATCAGCTGT ACGCACGCGT CCAAACATCG CCCGCCATTC AGGTACTGGC CAGTGAAGCG
CGCATCCGGG ATGCGCAAGT CTCACTGGCC CGCGCAAATG GCCGTAGTGA TTTAAGCTGG
CGAGTTGGCG TAAAACGTTT TGAAGAAACG GGGGATTCGG CATTTACCGC CGGGCTTTCC
ATTCCATTGT TTTCCGGTAA ACGCAGCAAC GGCGAAGTAA AAGCTGCACT TGCTAACCGT
AACGCTGTGG ATTACGCCCA AAAAGATCGA CTATTGCAAC TGCATGCGCG GCTTTTTGAA
GCGTGGTCTC TCAGAAAACA AAGTATTTCT GCGGCAAATC TTACTCGAAA GGTTGCCATT
CCCGCATTGG AAAAAGCACT CAGACTGACG ACTGAAGGTT TTGAGAGCGG GCGTTATCGC
TACCTCGATT TAATCGCCGC CCAGGAAGAA TTGCTCGCCA GTAAGCAGGC ACTCATCGAT
GCCGCTACAA CAGCCCTTGT GAGTCAGGCT GTTATTGAAA AGCTAACCAG TGAAGCCCTC
AACCCTTAA
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| Protein sequence | MRDSILYRCR RTWLWLAFLL CSSTPALGAE NADTLTLKKA LALTLTHNPQ LYQYRFSNEA
LNAQRQTNAL RPALALELEV ENFAGSGSNQ GLDAAETTLA LSSAIELGGK RQARLSYADA
RINQVEWEQQ AATLDVLGAL TEVYIEGLAT QANIQLAEES LTLSQSLLKT VKTRSARGAT
PEAEVMRAQA ALTRAEIRLA ALQEQFERHK VQLVRFWGET TANFATLEGS LYNFAATNSF
NQLYARVQTS PAIQVLASEA RIRDAQVSLA RANGRSDLSW RVGVKRFEET GDSAFTAGLS
IPLFSGKRSN GEVKAALANR NAVDYAQKDR LLQLHARLFE AWSLRKQSIS AANLTRKVAI
PALEKALRLT TEGFESGRYR YLDLIAAQEE LLASKQALID AATTALVSQA VIEKLTSEAL
NP
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