Gene Sde_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1546 
Symbol 
ID3965074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1991873 
End bp1992775 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content43% 
IMG OID637920624 
Productribosomal protein L35 
Protein accessionYP_527020 
Protein GI90021193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTT GGATAGCCTT CACCCTTATG GCGGTAGTCA TGCAGGCTGT GCGCACCGCG 
GCACAAAAAG ACCTGTCACG CGCGCTTAGC CCAATGGCGA CAACGCTTAC CCGTTATTTA
TACGGCATTC CTTTTGTTGC TCTATACCTA GTGGTGCTTT TACAAACCAA TACCGAATGG
GCAAATAGCT TTAACTATGC GCAACTTAAT AATGCACGGT TTCTAGTATT TGCAACCGTT
GCGGCAATAG TGCAAATAAT TGCCACAGCG TTTATGGTAA AAATGTTTAC GCTTAAAAAC
TTTGCAATAG CAACCAGCTT TGCTAAAACA GAAGCTATTC AAGTTGCGCT ATTTGCTTCT
GTTTTCTTTC AGGATCACCT CAACGTATAT GGCTGGGTTT CGGTATTCAT TGGCGTGGTA
GGCGTATTGT TTGTTTCGGG TTTGAAAATT GGTAAACCCC AATCCATTAG CTCAGCAACT
ATTTTTTACG GTACGCTTTC TGGCGCTCTG TTCGCTTGGA CTAGCCTCAG CTTACGCGAA
GCCAGCCTAT CGCTGGACTT GCCGCTAGTA TACAGCGCTG CACTCACACT AATGTATATG
GTAATTATTC AAACGGCTAT TTGCGCTATA TACATCACTT TTAAAGAAAG GAAACAATGG
CAAAAACTTA TGGCCCTACA AAAGCGTGGG CTATTTGTAG GTGCTACAAG TGCATTAGGC
TCTGTGGGCT GGTTTACGGC AATGAGTTTA CAAAACCCGG CGCTAGTAAA AACACTCGGC
CAAGTAGAAT TTTTTATAAC ACTGGGTATA ACCCACTTCT ACTTTAAAGA ACGCATAAAG
TGGCAAGAAA TGGTGGGCAT AATGTGTATT TTTGCGAGTA TTTTGCTTAT TTTGTATGTG
TAG
 
Protein sequence
MTLWIAFTLM AVVMQAVRTA AQKDLSRALS PMATTLTRYL YGIPFVALYL VVLLQTNTEW 
ANSFNYAQLN NARFLVFATV AAIVQIIATA FMVKMFTLKN FAIATSFAKT EAIQVALFAS
VFFQDHLNVY GWVSVFIGVV GVLFVSGLKI GKPQSISSAT IFYGTLSGAL FAWTSLSLRE
ASLSLDLPLV YSAALTLMYM VIIQTAICAI YITFKERKQW QKLMALQKRG LFVGATSALG
SVGWFTAMSL QNPALVKTLG QVEFFITLGI THFYFKERIK WQEMVGIMCI FASILLILYV