Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1112 |
Symbol | |
ID | 3968299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1440314 |
End bp | 1441513 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637920183 |
Product | response regulator receiver domain-containing protein |
Protein accession | YP_526586 |
Protein GI | 90020759 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAT CGGGTAGGCG ATTACTCGTC ATCGATGACG ATACCATTGT GCGTCAGAGT ATTGCAGCGT ATTTAGAGGA TAGCGGGTTT CTTGTGCATC AAGAAGCCGA TGGTCACTCC GCGCTTACGT GGTTGATGGA TAACCCTCCC TGCCTTGTTT TAACCGATTT ACGCATGCCC GGCACCGATG GCTTAACCTT GCTTAAAGCT ATTCGCGAGT GGGATGTAGA GCTGCCCGTT ATAGTTATAT CTGGCGCGGG GGCTGTGCAC GATGTAGCTG AGGCGTTGCG CCACGGAGCA TCTGACTACT TAGTAAAACC CATTGTGGAT ATGGAAGTAC TGGTGCACTC AATTCGCAGG GCTCTAGAGC GTCACGAACT GATAATTGAA AATCGCCAGT ACAGGTTGGA GCTAGAAAAA GCCAATAAAG AGCTGAAAGA ATATATTCGT GTGCTTGAGC GCGATCAGCT GGCAGGGCGC CGCGTGCAAA GTAAACTACT CCCACCGCCG GCTGTTAGCT TTGGCGGAAT CAATGTCGAT TACAAAATCA TCCCATCGTT GTATCTCAGC GGTGATTTTG TCGATTACGG CTTCCTTTCC AACCGTTATT TAGCCTTCTA TCTTACTGAT GTTTCCGGTC ATGGTGCTGC CTCTGCGTTT GTCACCGTAT GGCTTAAACA AATAGTGCGC CGCTTCTTTC GCGAGCAAGA AATCTTCAAT ACTAAGGACT CTTTCGAGCG AGATACCGCA TCTCTTCTAA AATTAATAAA TAAGGAAGTG ATTCGCTCGA AAGTAGGGGC GCATATGACC TGTTTTGTGG GGGTGATAGA TACCCATACC CACGAGATGC GCTATGTGGT GGCGGGGCAT TTACCGCTGC CGCTGCTAAT AGCCAACGGT CGTGCCGAAT ACTTAGAAGG TAAAGGCAAG CCACTGGGCA TATTTGAAGA TGCCGAGTGG GAAGTGCAGA GTATTCAGCT GCCGCTACAG CAGCAGTTTT CGTTGGTGGT GTTCTCCGAT GGCGTGCTAG AAGTACTACC GCCAGATAAC CTCATCGAAA AAGAAAATTA TTTACGCAAT ATACTGTCAA AACAACAGGG TAGCATTGAA GATATATGTG CGGCGTTACA AATCAACAGC TTAGATGCTG CGCCGGATGA TATTGCTGTT CTCAAAATAG ATAATGAGAT GTTGAAATGA
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Protein sequence | MSQSGRRLLV IDDDTIVRQS IAAYLEDSGF LVHQEADGHS ALTWLMDNPP CLVLTDLRMP GTDGLTLLKA IREWDVELPV IVISGAGAVH DVAEALRHGA SDYLVKPIVD MEVLVHSIRR ALERHELIIE NRQYRLELEK ANKELKEYIR VLERDQLAGR RVQSKLLPPP AVSFGGINVD YKIIPSLYLS GDFVDYGFLS NRYLAFYLTD VSGHGAASAF VTVWLKQIVR RFFREQEIFN TKDSFERDTA SLLKLINKEV IRSKVGAHMT CFVGVIDTHT HEMRYVVAGH LPLPLLIANG RAEYLEGKGK PLGIFEDAEW EVQSIQLPLQ QQFSLVVFSD GVLEVLPPDN LIEKENYLRN ILSKQQGSIE DICAALQINS LDAAPDDIAV LKIDNEMLK
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