Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0676 |
Symbol | |
ID | 3964927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 861793 |
End bp | 862344 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637919737 |
Product | hypothetical protein |
Protein accession | YP_526150 |
Protein GI | 90020323 |
COG category | [S] Function unknown |
COG ID | [COG3148] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0390701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000107509 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCGTCCAC TTTGTTCACA CTGCTTTCGT CCGGTCTCTG CTTGCTATTG CCAGGTTGTT AATCGCATTG CTACCCGCGT GGAGGTTGTT ATTTGGCAGC ATCCAAGCGA GCAAAATCAT CCCAAGGGCA CAGCGCAGCT GTTGCATATG TGCTTGCCAA ATAGCCGACT TGTAGTGGGG GAGCAATTCA GTAAAAGTGA TTTGAGCTTG CGCGACTGTG CTTTACTGTA CCCGCACTCC GAAGACTGTA AGCTCGTTAC CCAGCCAAAT AGGGTAAATC AGTTGCTGGT TATAGATGGC ACCTGGCGTA AAAGCCGCAA AATATTGCAC CTTAACCCCT GGTTATTAGC GTTGCCTAGG CTAAGTATTC ATGCTCAGCA GGGTAATTAC ACTATTCGCA AAGCGGAGGC GGCACACCAA CTGTCTACCT TCGAGTCGAC GACCAGTGCG CTAAATTTAC TCGAAGGCGG TGCGCAGTTA GCAGTGTTAG ATGCTGTGTT TGCGCAATAT ATTGCAAGTA TTCAAAAATT TAGACCAACG AATAATAAAT AA
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Protein sequence | MRPLCSHCFR PVSACYCQVV NRIATRVEVV IWQHPSEQNH PKGTAQLLHM CLPNSRLVVG EQFSKSDLSL RDCALLYPHS EDCKLVTQPN RVNQLLVIDG TWRKSRKILH LNPWLLALPR LSIHAQQGNY TIRKAEAAHQ LSTFESTTSA LNLLEGGAQL AVLDAVFAQY IASIQKFRPT NNK
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