Gene Sde_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0676 
Symbol 
ID3964927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp861793 
End bp862344 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content47% 
IMG OID637919737 
Producthypothetical protein 
Protein accessionYP_526150 
Protein GI90020323 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0390701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000107509 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCGTCCAC TTTGTTCACA CTGCTTTCGT CCGGTCTCTG CTTGCTATTG CCAGGTTGTT 
AATCGCATTG CTACCCGCGT GGAGGTTGTT ATTTGGCAGC ATCCAAGCGA GCAAAATCAT
CCCAAGGGCA CAGCGCAGCT GTTGCATATG TGCTTGCCAA ATAGCCGACT TGTAGTGGGG
GAGCAATTCA GTAAAAGTGA TTTGAGCTTG CGCGACTGTG CTTTACTGTA CCCGCACTCC
GAAGACTGTA AGCTCGTTAC CCAGCCAAAT AGGGTAAATC AGTTGCTGGT TATAGATGGC
ACCTGGCGTA AAAGCCGCAA AATATTGCAC CTTAACCCCT GGTTATTAGC GTTGCCTAGG
CTAAGTATTC ATGCTCAGCA GGGTAATTAC ACTATTCGCA AAGCGGAGGC GGCACACCAA
CTGTCTACCT TCGAGTCGAC GACCAGTGCG CTAAATTTAC TCGAAGGCGG TGCGCAGTTA
GCAGTGTTAG ATGCTGTGTT TGCGCAATAT ATTGCAAGTA TTCAAAAATT TAGACCAACG
AATAATAAAT AA
 
Protein sequence
MRPLCSHCFR PVSACYCQVV NRIATRVEVV IWQHPSEQNH PKGTAQLLHM CLPNSRLVVG 
EQFSKSDLSL RDCALLYPHS EDCKLVTQPN RVNQLLVIDG TWRKSRKILH LNPWLLALPR
LSIHAQQGNY TIRKAEAAHQ LSTFESTTSA LNLLEGGAQL AVLDAVFAQY IASIQKFRPT
NNK