Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0579 |
Symbol | |
ID | 3964986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 715208 |
End bp | 715708 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637919642 |
Product | hypothetical protein |
Protein accession | YP_526055 |
Protein GI | 90020228 |
COG category | [S] Function unknown |
COG ID | [COG3812] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0345367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGCAA GTGCACCCAA TATTTTTATC TATTATTTAG ACCGTCTCGC GTTTATTTTA CAAAAAATAG ACGTAATGGC TGGCGACGAG ACATTGCAAG CGCGTTTAAC CGACGACATG CTGCCGCTAA TAAATCATGT GCGGGCCTGT GCCAATTTTA GCCTTCGCGG GTGCTGTCCG CTAATAGGGC AGCCGGCAGT TAGTTTCGAA AACGAAATAA ATAGTTTTGA TGGTTTGCAG CAACAAATAG AGCAAACTAT TGCGTATCTC AACTCGCTAG TTATTACCGA AGCGAATTTG CCTAAAAGTG TGCAGGATAA AGCCGGCTTC GCAACGGTTA CGCTCGGGCC TTACGAGTAC CTTTTCCAAT ATATCTTCCC TAATTTTTAT TTTCACCTGA ATATGGTTTA CGCCATTGCT CGCCAACAAG GTGTGCCGCT AAGTAAGCAA GACTACGATG CATACCATAA ATACCCCACG GGGTTTTCTT TCGAACGCTA A
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Protein sequence | MLASAPNIFI YYLDRLAFIL QKIDVMAGDE TLQARLTDDM LPLINHVRAC ANFSLRGCCP LIGQPAVSFE NEINSFDGLQ QQIEQTIAYL NSLVITEANL PKSVQDKAGF ATVTLGPYEY LFQYIFPNFY FHLNMVYAIA RQQGVPLSKQ DYDAYHKYPT GFSFER
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