| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0174 |
|---|
| Symbol | |
|---|
| ID | 3964808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 215113 |
|---|
| End bp | 216189 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637919233 |
|---|
| Product | acyltransferase-like |
|---|
| Protein accession | YP_525650 |
|---|
| Protein GI | 90019823 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1835] Predicted acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATTAT TACAGTCGAA GTTCGACCTA ACCTATAGCC CAGCGCTAAA CGGTTTGCGC
GGCTATGCCA TTTTACTGGT AATTATATTT CACGCCGCAC CCCACGATTG GCTTATAGGC
GGATACCTAG GGGTAGATGT TTTTTTCACG CTTAGTGGAT TTTTAATTAC CAACCTATTA
ATTAAAGAGT GCCTCGGCAA GAAGCGTATA AACCTCAAGA ATTTTTATTT AAGACGGTGT
TTACGGCTAC TGCCCGCATT ACTATTAGTT ATTACTGGTT TCACTATCTT TAGTTTAATC
GCCTTTGATC GCGGTGCAAT AATTCGCAGT GCAATTGACT CTGTTATTGT GCTCGCCAAT
GTCGCCAATT GGCCGCGTGC ATTTGGCATA TGGCGCCCTG AATGGCTTGG TAACACGTGG
TCGCTTTCTA TCGAAGAACA GTTTTATTTG CTATGGCCCC CCGTACTGTA TTTTCTTACC
AAACGGAATG TGCAGTTATC CACGTTAATT AAAATAGCGA TAGGAATAGC TATATTAGCT
TGGGGTTGGC GCATTTACTT AACAACCCAA GGCGCAGATT GGATGCGAGT TTATAATGGC
ACCGACACGC GCATAGACTC TTTACTTATT GGCGCAGCCC TAGGCATTGC CGTTTATTTA
GCATCATTCG ATGGCTTTAT TCACGCAAAC CGCAAATTAA TTAGCTACTT GGCAGTTACC
GCGTCACTTA TAATATTAGG CCTATCTACA ATAGTTAGCT TCAAATCGCC ATTACTTTAT
TACTTTATTT TAGTGATAGT AGAGCTTTGC ACCTGTGTCA TCATATTAAA TGCATGTTAC
GAAGGGCCTT CGATTATTAA AAAAGCATTA GAATTACCAA TATTGGTTTG GTTAGGCAGT
ATTTCTTACA GCCTTTACCT TTGGCACTAC CCAATATTCA GGGCGTTAAG AGAAATGGCA
GAATTTTCGC CGCTATTGAT ATTAATAGTG GGCACGGGAA TTTCAGTTTG TATTGCTGCA
CTATCTTATT ATTTTGTAGA AAAGCCCATA CTTGCTTACA AGCAAAAACT CCACTAG
|
|---|
| Protein sequence | MTLLQSKFDL TYSPALNGLR GYAILLVIIF HAAPHDWLIG GYLGVDVFFT LSGFLITNLL
IKECLGKKRI NLKNFYLRRC LRLLPALLLV ITGFTIFSLI AFDRGAIIRS AIDSVIVLAN
VANWPRAFGI WRPEWLGNTW SLSIEEQFYL LWPPVLYFLT KRNVQLSTLI KIAIGIAILA
WGWRIYLTTQ GADWMRVYNG TDTRIDSLLI GAALGIAVYL ASFDGFIHAN RKLISYLAVT
ASLIILGLST IVSFKSPLLY YFILVIVELC TCVIILNACY EGPSIIKKAL ELPILVWLGS
ISYSLYLWHY PIFRALREMA EFSPLLILIV GTGISVCIAA LSYYFVEKPI LAYKQKLH
|
|---|
| |