Gene Sde_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_0068 
Symbol 
ID3967152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand+ 
Start bp84125 
End bp84706 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content42% 
IMG OID637919127 
ProductTetR family transcriptional regulator 
Protein accessionYP_525544 
Protein GI90019717 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATATA CAAAGGCTCA CAAAAGCAAA ACTCGGGAGA TAATTCTGGA AAATTCTTTC 
AGGCTATTTT CTGTAAAAGG TTTCAAAGGC GTTACGATAA ACGATTTGAT GAATAATTGC 
GGGCTCACTC GTGGTGGCTT CTACGCCCAT TTCAGTAGTA AAGCAGAACT TTATAGAGAG 
GCATTAAAAT TTAGAGCCAG TCGCACTAAG CTTGCGGGCC TTAAGCCAGA GGGTACATCT 
AATGAAGAGT GGTTGGCTTT GTTGCTAAAT AAGTATCTAA GCTTGGAGCA TGTTAAAGGA 
GAGCGCTCTC TGTCTTGTCC GCTAGCTTTT TTGACCACAG ACATCAACAT GCAGAATAAA 
GAAATAAAAG CAGCTTATGC CGACACTTAC CATGGCATGA ACACGGCAAT TATGGAGTAT 
GCAAGTAGCT ATACCGACTG TGACGAGCAA GATATTTTGT CGGTAACTGC AATGATGATT 
GGCGCTGTTG CTATAGCTAG AACGCTTCAG GATCAAGATT CGATTGAGCG TTTACTATCT 
GCGTGCAGGC GAGAAGTTGG TTTAAAATTA GGTGGTATAT GA
 
Protein sequence
MPYTKAHKSK TREIILENSF RLFSVKGFKG VTINDLMNNC GLTRGGFYAH FSSKAELYRE 
ALKFRASRTK LAGLKPEGTS NEEWLALLLN KYLSLEHVKG ERSLSCPLAF LTTDINMQNK 
EIKAAYADTY HGMNTAIMEY ASSYTDCDEQ DILSVTAMMI GAVAIARTLQ DQDSIERLLS 
ACRREVGLKL GGI