| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0048 |
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| Symbol | |
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| ID | 3965356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 52828 |
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| End bp | 53202 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637919107 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_525524 |
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| Protein GI | 90019697 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.979137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGTGA CTGGCGAAAT AAAATTTACC CTTTTAAGCC AAACCGATAC CGAAGTAACC
GCGGAAATGC CAGTACAAAA GGGTATACTT AACCCCTTTG GCATAGTGCA TGCCGGTGCA
ATGCTGTGGT TTGCCGACGT AGCGGCTTCT GTATTGGTTA TTGGCAAAAC TATGCCTACA
GAAGGTATGC AGGGCTTTCC ATTAGCGATC AATCTAAATG CAAATTTCAC CGGCAATAAT
AAAACGGGTA AGTTTCTAGC AAAGAGTGAA TTTATTAAAA AAGGTAAAAC GGTAAGCGTA
GTGCGCACCC AAGTAACCGA TACAGATGGC AAAATAATAG CAGATGTAAC CACTAATCAT
TTGCTGTCTA GCTAA
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| Protein sequence | MEVTGEIKFT LLSQTDTEVT AEMPVQKGIL NPFGIVHAGA MLWFADVAAS VLVIGKTMPT
EGMQGFPLAI NLNANFTGNN KTGKFLAKSE FIKKGKTVSV VRTQVTDTDG KIIADVTTNH
LLSS
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