| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0029 |
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| Symbol | |
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| ID | 3968162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 32579 |
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| End bp | 33349 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919088 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_525505 |
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| Protein GI | 90019678 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2968] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.150113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAGC CTTTGTATGG GTTGGTTTTT GTTGCTGCGT TTAGTGGTAT GGGGGTTGTT
GCACAGCCCG AGATTAAAGG CTCGCCTGAA GAGCTGCGCC AGTTTTTACA CCCGCGCGAC
AATACAGTTT CGCTTACCGG GCAGGCTGAA AAAACGGCCT ATAGTGATAA AGCCATTATT
GAATTAATGG TTACTACCGA GAGTAAAACC CTTTCTAAAT CTATTGAAGA TAACAATGCA
GTAAGGCAAA CACTGGTTAA AGCGTTAATA GCAGGCGGTA TTGCTGCCGA TGAAATAAAC
AACGCTAAGT TTTCTTCGTC GCCACAGTAT GGCTGGTTTG GCAGTAAGCC AGATAGCTTT
GAGGTGAATA ACCGCGTATC GGTAGGGGTA ACCAGCGAGG CGCACTTTTT GTTGGTGTCT
AAGTTGGCCG ATGCGCAAAA AGAAATTAAC GTCGTTAATA CGCGCTTCGA ACATACCAAG
AAAGACGAGC TTAAAAACGA AGTGCGCAAA ATGGCAATGG ATAAGATTCT AGAGCAAAAA
GCCTTTTACG AAAAAAGCTT AAACGTAAAA TTGGTGGCCA TTGCATTTAA CGACGGCGAT
GTGGGTTTTA CCGGCATGCG CCAAGAGCGC GCCATGGCAC CGGCAAAAGT TAAACTGCAA
AGCCTTGCCG AACACGATAC CGCAGCACCC GCACAGAGTA CGGGTTTTGA CGAGGTTAAA
TACCACGCCA ATATCTATGT GCAATATGTG GTAGCGAGCG AAAGTAAGTA A
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| Protein sequence | MFKPLYGLVF VAAFSGMGVV AQPEIKGSPE ELRQFLHPRD NTVSLTGQAE KTAYSDKAII
ELMVTTESKT LSKSIEDNNA VRQTLVKALI AGGIAADEIN NAKFSSSPQY GWFGSKPDSF
EVNNRVSVGV TSEAHFLLVS KLADAQKEIN VVNTRFEHTK KDELKNEVRK MAMDKILEQK
AFYEKSLNVK LVAIAFNDGD VGFTGMRQER AMAPAKVKLQ SLAEHDTAAP AQSTGFDEVK
YHANIYVQYV VASESK
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