| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0027 |
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| Symbol | |
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| ID | 3968160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 30581 |
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| End bp | 31798 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637919086 |
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| Product | hypothetical protein |
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| Protein accession | YP_525503 |
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| Protein GI | 90019676 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3577] Predicted aspartyl protease |
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| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTGTTG CCATTGGTTG GTGGGTAACT ACATCGTTTA TTCCCACAGC GCCACACCCC
TCAACCATAT CGCAGCGCGC GCCTAACCCC GCTGTTAACC CTCATCCTGC GGCCGATGCC
GGCACCAGTC AGCCCGATCT TGTACTGCAA TTTCCTTCCG CGCAAGAACC CAAGCTCGCA
GCTAGCTCAA GCGGCGAAAA TGAGTTTGTG CAGAACGACA CGCGCCTAGA AGCTTTTATT
GAGCTAATTA ACAAACGCAA ATACAGCGAA GCGCTAGAGG TATACATAGA GGTTGAAACC
TTTTACCCCG AAGATCTCGC CATTTTTCGC TCCACCTTAC TCGATCAACT CAAAATGTAT
TTGGCATCTA ACAATACCAA TGCCTTTACC GGGCTGAGCG ATGCGGTACT ACAGGCTTAC
TACAGCGATA TTGAAGTCTT GGTGTTGGTG GCCGATTTTC ACGCTAAGCA AAACGAGTTG
GGTGAAGCGC TTACGGTATT TCAACTGGCA AAAAGCTATG CCGAAGGGGT GGGTAAAGGC
CAATTAGTGC AAGAAAGGCT GTCGCGTTTT GTTGAGCACA CCGTAAGTTA CCTAAGCAAC
AAGGGCCGCT GGGCTCAAGT GCAAATGTTT TTGGAAGACC TACTCGACCG CGATCTCGCC
ACACCAAAGC AGCAAATACT GTTAGCCGAA ATCTACTTTC ATAATGGGTT TCCCGATATT
GCCAAAACCC TATTGGCAAA ACATAGAAAC ACACCGGGTG TAAGCAACAA GGTTGCCCGC
CTTTATGCTG CCCATGAGAA GGGCGAAAAA ATAACCCCCG AAATTACAGG TTTTGATGCC
ATAGTTAACC TCGCCCAGCA CGGTGCCCAC TATTTGGTGC CCTTGCGCTT AGGTGGGCAG
GTAGATGTAA ACCTGCTATT GGATACAGGT GCTAGTATTA CTACAGTCTC ACCCGAAAAA
TTACAAACAT TGCACAATCG TACGCGGGTG CGCTACAAAG GCCGGCGCCA CTTTAACACC
GCTAACGGTA TTACCAGTGC ATCCACCTAT GAAGTGGAAG AAATTAGAAT TGGGCCCTAC
ACCTTAAACA ATGTAGAAGT AGCAGAGATG ACACTTAGCA ACGATGTGGA CGGGTTGTTA
GGCATGAATA TTCTCGGCCA TTTCCACTTT CAGTTAGATC AAGTGCAAGG TGATTTGTTG
TTAACGCCGC GAGACTAA
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| Protein sequence | MGVAIGWWVT TSFIPTAPHP STISQRAPNP AVNPHPAADA GTSQPDLVLQ FPSAQEPKLA
ASSSGENEFV QNDTRLEAFI ELINKRKYSE ALEVYIEVET FYPEDLAIFR STLLDQLKMY
LASNNTNAFT GLSDAVLQAY YSDIEVLVLV ADFHAKQNEL GEALTVFQLA KSYAEGVGKG
QLVQERLSRF VEHTVSYLSN KGRWAQVQMF LEDLLDRDLA TPKQQILLAE IYFHNGFPDI
AKTLLAKHRN TPGVSNKVAR LYAAHEKGEK ITPEITGFDA IVNLAQHGAH YLVPLRLGGQ
VDVNLLLDTG ASITTVSPEK LQTLHNRTRV RYKGRRHFNT ANGITSASTY EVEEIRIGPY
TLNNVEVAEM TLSNDVDGLL GMNILGHFHF QLDQVQGDLL LTPRD
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