| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0006 |
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| Symbol | |
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| ID | 3968825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 7724 |
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| End bp | 9664 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637919065 |
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| Product | acetoacetyl-CoA synthetase |
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| Protein accession | YP_525482 |
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| Protein GI | 90019655 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.497617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.392863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTTGGC AACCCAGCGA AGAGCGCAAA GCGGCATGTA CCATGTCGGC GTATATTCAA
TACTTAAATT CTCGCTACTC TCTAGGAATA GAAACCTACC CAGAACTACA TCGGTTTTCG
GTGGAGCGTG CTGCCGAGTT TTGGACTAGC CTGTTCGACT TCTTCGATGT GCAATACAGC
GGTTCTTTAC TGCCCGCCAA TACAGATTGG GGCTTTAGTG AATATGGTTG GTTCCCCAAT
GTTGAGCTTA ACTTTGCCGA AAACCTGTTA CATAAGGGCA AACCACAACA GCGCGCGCTA
TACGGTATTT TAGAGTCGGG CGAGGTACAA AGTATTACCT ATGCCGACCT TCGCAAAAGT
GTTGCTGCTT TGCAGGCAGG TATTGCCGAT AGCATTAAAG AAGATGACGT GCTGGCCTGT
TATATGCCCA ATATACCGGC CACAACCATA AGTATGCTGG CCGCAACAGG GCTGGGTGGT
GTGTTTACAT CAACGAGTTG CGACTTCGGT GAAGAGGGCG TTATAGACCG TTTTGGGCAA
TCGGAGCCCA AAGTTTTAAT CGCGGCGCTA GCCTACCAAT ATAACGGTAA AAGATTCGAT
TTAACGCAAA AAATAGCGAA CATCGTTAAA AAAGTAAAAA GCATCAAAAA AGTGATATTG
GTCGACTTTT TAAACGATGC CGATCAAGAC GCGGCCTTAG CTGCGATTCC CAATGCTCAA
ATGTGGCAAC AGGTTGTAAA CACCACTAGC GAGTGTGAAA CGCCTAAATA CGTGAAGCGA
AAATTCGCAG ACCCGCTCTA CATAATGTAT TCGTCGGGCA CCACTGGCCA GCCTAAATGC
ATTGTGCATA CGGTGGGCGG TGTGTTGTTG CAGCATATTA AAGAGCTGGG TTTGCACGCA
GATGTGACCG AACAAAAGAA TCTATTCTTC TTTACTACCT GCGGTTGGAT GATGTGGAAC
TGGCTGGTTA GCGGCTTATT TTTTGGCGGC ACCGTTACCC TATACGAAGG TAGCCCAACC
AAGCCGACTA TAATCGATTA CTGTGCCTTA ATAGATAAAC TTAATATCAA TATTTTTGGT
ACCTCGCCAA AGTTTCTTAA AGCTTTAGAA GGCGAAACAG ACGGGCTAAA AACGCTAAAT
TTAGCGAGCT TAGAATCAAT ACTTTCTACC GGCTCACCCT TATTGCCCGA GCAATACGAC
TTTGTTTACC AACATATAAA GCAAGATGTA GCACTGGCGA GCATTTCGGG CGGCACTGAT
ATTTTGGGCT GCTTCTTTTT AGGTAACCCT TTGCTACCTG TGTATAAAGG TGAGTTGCAG
TGCGCAGGCT TGGGTATGGC GGTAGATTGC GTGGATGAAA ATGGTGCTAG AGTAGAGCGC
GGTAAAGAGG GTGAGTTAAT TTGCCGGCAG AGCTTTCCCT CTAGGCCGCT CGGTTTTTTA
AACGACGCCG ACAACCAGAA AATAAATAAT GCATACTTTA ACCAAGTTGC GAACGTGTGG
TATCACGGAG ACTTTATTGC CATAACCGAA CACGGCGGGG CGGTTATCTA CGGCCGCAGT
GATGCCACCC TAAACCCTGG CGGGGTGCGC ATAGGTACCA GTGAAATATA CCGTCAAACC
GAAAGCTTTG ATTACATACA GGATACTGTG TGCATAGGTA AGCAAGTGGA CGGCGATGTT
GATTTATACC TATTTGTTAA GCCCATGCCA AACCAGACCC TTACTGACGG GCGAATAACT
GAGATTAAGC AGCGTATTAA ACAAAACACC ACGCCAAGGC ATGTACCTAA GCGGGTAATA
AGCGTGGTGG ATATTCCTTA CACGCGCTCA GGTAAGAAGA TGGAGTTAGC GGTAAGTCGA
ATAGTTAACG GAAAAGAAAT AACTAATATA GACGCTATTG CCAACCCAGA GTGTTTAAGC
GAATATGAGC TGTACCGCTA G
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| Protein sequence | MLWQPSEERK AACTMSAYIQ YLNSRYSLGI ETYPELHRFS VERAAEFWTS LFDFFDVQYS
GSLLPANTDW GFSEYGWFPN VELNFAENLL HKGKPQQRAL YGILESGEVQ SITYADLRKS
VAALQAGIAD SIKEDDVLAC YMPNIPATTI SMLAATGLGG VFTSTSCDFG EEGVIDRFGQ
SEPKVLIAAL AYQYNGKRFD LTQKIANIVK KVKSIKKVIL VDFLNDADQD AALAAIPNAQ
MWQQVVNTTS ECETPKYVKR KFADPLYIMY SSGTTGQPKC IVHTVGGVLL QHIKELGLHA
DVTEQKNLFF FTTCGWMMWN WLVSGLFFGG TVTLYEGSPT KPTIIDYCAL IDKLNINIFG
TSPKFLKALE GETDGLKTLN LASLESILST GSPLLPEQYD FVYQHIKQDV ALASISGGTD
ILGCFFLGNP LLPVYKGELQ CAGLGMAVDC VDENGARVER GKEGELICRQ SFPSRPLGFL
NDADNQKINN AYFNQVANVW YHGDFIAITE HGGAVIYGRS DATLNPGGVR IGTSEIYRQT
ESFDYIQDTV CIGKQVDGDV DLYLFVKPMP NQTLTDGRIT EIKQRIKQNT TPRHVPKRVI
SVVDIPYTRS GKKMELAVSR IVNGKEITNI DAIANPECLS EYELYR
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