| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3931 |
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| Symbol | |
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| ID | 3961571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4389552 |
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| End bp | 4393088 |
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| Gene Length | 3537 bp |
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| Protein Length | 1178 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637918756 |
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| Product | SNF2-related |
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| Protein accession | YP_525161 |
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| Protein GI | 89902690 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAACG ATAGCGCTGC TGTCGGCCCC TGGTTCAGCA CCCAGTCGCT GGCCAACTCG
ATCGACCGCG CCACCTGGGA CCGCGGCCTG ACGCTGTACC TGGCGCAAAA GGTGCTGTCG
CTGGAAATCA AGCCCATGGG CGACTACTGG CAGTTGCTGG CCACTGTGCA GGGCAGTCAA
CGCTGGCCCT ACCAGGTGTC GATCGAGCTC ACATTCAAGC CCAATGGCGA AGTCGCCAAC
TGGGACAGCG ACTGCAGCTG CCCGGTTGGT TACCAGTGCA AGCACGGGGT GGCGGTGCTG
CTCAAGGCGG CGCAGCAGGG GCGCCGGCTG ATGGACCCCA GCGCGGCGCT CAGTGCGTGC
GCGCCTGCCG CGCCCACGCC CGAGCAGATT GAAGCGGCGC AACAGGTCGC ACGGGAGCGG
GCCGCCGAAC AAGCCCGCCG CGAGGCCGAG GCGCCCCTGT TGCACTGGCT GCAGGAGTTG
AACCAGGCTG CGCGCCAGGG CGCGCAGGCC GGCATCGACA CGGACGCCCG CTCTGTGCAC
GAGCAGTATC TGTACCTGTT GTCCGTGGCC GGCGCCAAGG GCCGCACGCC CGAGCTGCAA
ATGGACGTCG TCGTGTCCTG CCCCAAAGTC CATGGCGGCT GGGCCAAACC CAAAGCGCTG
CGCATTGCAC CGGCGCGCGG ACAGACCACG TTTGACCAGG CCACGCAGGT CGATCAGGAG
TTACTGCAGC TGATGCGTGC CCTGCCCAGC GGCAGCAGCG GTTACTACAG CTACGGTTAC
AAAGCCAAAG TCACGTTGTA CGGCAAGATT GGTGTCATGG TGCTGCAGCA AGCGGCCAGT
ACCGGGCGCT TGCTGTTTGA GAGCGGCAAG GGTCTGCCGG GCGCCCCGGT GCAATGGGGC
GCGCCGCAGG ACTTGCGCTG GGAATGGCAT GAAGTAGCCA GCCCGAACGA TGCCGAGCCC
GCCTGGGCCC TGCGCGCGCG CTTAGGCAAC GCTAGAGCGC AACTGTGCCT GAACACGCCG
ACCTTGTACC TCGATGCGGC CAGTGGTCTG TGCGGCTTGG TTCAGGCTGA CGGCGTGCCC
GCCGCGCAGC TGTCGGTACT GCTGAAGGCG CCGCCGCTCA AACCCTCGGC GTTGAAGACG
CACCAACTGG CACTGCTGCA ACAGCTGGGC CCGGTGCCGC CACCGCCGGT GCTGGAGCAG
TTGCCCACAC TCTCGGGCAT CACACCGCAC GCCTGCCTGC ACATCGCACC GCTGCCGGTG
TCAGACACCC TGCTCAAAGG TTTGCTGCAG GCGCAACTGC AGTTTGACTA TGCGGGGCGC
CGGGGTTGGT GGGCGGGTCT TGGCACCACG GTGCTGGTGG ATGACGCGCA GGGCCGCGTG
CTGCTGCACC GCGACCCGGA GGCCGAGTTT GAAGCCGTCG CGCAGCTGAC GGGAATGGGG
CTGCGCTCCA CCGAGCCGGG CCGCTTTGGC CTTCCCGGCG ACGCCTCGCA GCAAAGCTGG
CTGCAATGGG CGGACAGCGG TTTTGCCGCG TTCAAGGCGG CCGGCTTTGA GGTCACGCTC
GACGACGCAC TGATTGACTG GATCAGCCAC GCCGATGACC TCGACGTGAA GCTGCAGGGC
CGGGGCGATG ATGAGGACGG CGCGCATGAC CCGCATGCCG GTCACGCCGG CGTCAATGGC
AAGGAAGACG AGGACGGTGA CGCGGGCGTC ACCTCGCCCT GGTTTGACCT GTCCCTGGGG
ATGGAGATCA ACGGCGTGCG CCACAACATC CTGCCCTGGC TGCCGACACT GATTGCACAG
GCGGCCACCA GCCCGCTCGA CCCGGCCACC GGCTTGCCCA ATATCCCGCC GTTTATCTTT
TTGCCCAACA CCGCGGGGCA AGGCTTCATC CGCCTGCCCA CCGACGCGCT CAAGCCCTGG
ATGGCCGCGC TCCTGGAGCT GGTGGGCGAC CGCAGCCATG ATTTCACCGG CGACTGCCTG
AAACTCTCGC GCCTGGATGC CATGCGCACC ACCGCTTCGC TGGGGGAAGG CGCGGTCTGG
GACGGCGCAC AGGCACTGCG CAAGTTGGTC AAGCAACTCA GCGGCCAGAC CGAATTACCT
ACGGTGCCGG TGCCGACCAG CGTGCAGGCC AGCCTGCGCC CGTACCAGCA GCAGGGCCTG
AACTGGCTGC AGTTCTTGCG TCAATACAGT CTGGGCGGCA TCCTGGCCGA CGACATGGGG
CTGGGCAAAA CGCTGCAAAC CCTGGTCCAC ATCCAGGTTG AAAAAGACGC GGGCCGCCTG
AAATACCCGG CGCTGATCGT GGCGCCGGTC AGCCTGATGG GCAATTGGCA GCGCGAGGCC
GCGCGCTTTT GCCCCAACTT GCGCAGCCTG GTGCTGCATG GCAAAGACCG GCACGAGCTG
GCCGACAGCC TGCACGACCA TGACATCGTC ATCACGCCTT ATTCGCTGCT GGAGCGCGAC
CGCGAGCGCT GGCTCAAGAC CCGCTGGCAC CTGGTGGTGC TGGACGAAGC GCAAAACATC
AAAAACGCCA GCACCCAAGC CGCGCAGGTG GCCAGCCAGA TGCGCGCGCG CCAGCGCCTG
TGCCTGTCGG GCACGCCGAT GGAAAACCAT CTGGGCGAAA TCTGGAGCCT GTTCCACTTC
CTGATGCCGG GCTTTCTGGG CAGCCAGAAG AAGTTTCAGG ACCTGTTTCG CACGCCGATT
GAAAAATTGG GCAACCCGGA GCGGCTGGAA CAATTGCGTT CGCGCGTCAC GCCCTTCATG
CTGCGGCGCA CCAAGGCGCT GGTGGCGGGC GAGCTGCCGC CCAAGATCGA GACCGCGATG
CGCGTCGAGC TGACCGGCAA ACAAGCAGAC CTGTACGAAA CCATTCGCTT AGGCATGGAA
AAGAGCGTGC GCGAAGCGCT CGACACCAAA GGCATGGCCA AGTCGCAGAT CACGATTCTG
GATGCGCTCT TGAAGCTGCG CCAGGTCTGC TGCGACCCGC ATCTGGTGAC GCTGGCCGCT
GCCAAAAAAG TGAGCAACTC GGCCAAGCTG GAGCGGCTGA TGGAAATGCT GCCCGAGATG
CTGGCCGAGG GCCGGCGCAT CTTGCTGTTT TCGCAGTTCA CCAGCATGCT GAAATTGATC
GAGGCGGAGC TTCAAAAGCG CAATATCCCA TGGATCAAGC TCACCGGCCA GAGCCAGAAG
CGCGATGCGT TGATCGAGCA GTTCACCAGC GGCGCCGTGC CGTTGTTCCT GATCAGCCTG
AAAGCCGGTG GTGTCGGCCT GAACCTGCCG CAAGCCGACA CCGTGATCCA CTACGACCCG
TGGTGGAACC CGGCAGTCGA AAACCAGGCG ACCGACCGCG CCCACCGCAT CGGCCAGACG
CAAAGCGTGT GGGTCGTCAA GCTGGTGGCG CAAGGCACGA TTGAAGAGCG CATCCTGGGC
CTGCAAGAGC GCAAGGCGGC GCTGGCCGAG AGCATGTACA GCGGCGCAGT CGGGCGCAAA
CAGCCGCTGT TTTCCGAGAG TGACCTGGCG GAGTTGCTCA AGCCGCTATC GGTTTGA
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| Protein sequence | MQNDSAAVGP WFSTQSLANS IDRATWDRGL TLYLAQKVLS LEIKPMGDYW QLLATVQGSQ
RWPYQVSIEL TFKPNGEVAN WDSDCSCPVG YQCKHGVAVL LKAAQQGRRL MDPSAALSAC
APAAPTPEQI EAAQQVARER AAEQARREAE APLLHWLQEL NQAARQGAQA GIDTDARSVH
EQYLYLLSVA GAKGRTPELQ MDVVVSCPKV HGGWAKPKAL RIAPARGQTT FDQATQVDQE
LLQLMRALPS GSSGYYSYGY KAKVTLYGKI GVMVLQQAAS TGRLLFESGK GLPGAPVQWG
APQDLRWEWH EVASPNDAEP AWALRARLGN ARAQLCLNTP TLYLDAASGL CGLVQADGVP
AAQLSVLLKA PPLKPSALKT HQLALLQQLG PVPPPPVLEQ LPTLSGITPH ACLHIAPLPV
SDTLLKGLLQ AQLQFDYAGR RGWWAGLGTT VLVDDAQGRV LLHRDPEAEF EAVAQLTGMG
LRSTEPGRFG LPGDASQQSW LQWADSGFAA FKAAGFEVTL DDALIDWISH ADDLDVKLQG
RGDDEDGAHD PHAGHAGVNG KEDEDGDAGV TSPWFDLSLG MEINGVRHNI LPWLPTLIAQ
AATSPLDPAT GLPNIPPFIF LPNTAGQGFI RLPTDALKPW MAALLELVGD RSHDFTGDCL
KLSRLDAMRT TASLGEGAVW DGAQALRKLV KQLSGQTELP TVPVPTSVQA SLRPYQQQGL
NWLQFLRQYS LGGILADDMG LGKTLQTLVH IQVEKDAGRL KYPALIVAPV SLMGNWQREA
ARFCPNLRSL VLHGKDRHEL ADSLHDHDIV ITPYSLLERD RERWLKTRWH LVVLDEAQNI
KNASTQAAQV ASQMRARQRL CLSGTPMENH LGEIWSLFHF LMPGFLGSQK KFQDLFRTPI
EKLGNPERLE QLRSRVTPFM LRRTKALVAG ELPPKIETAM RVELTGKQAD LYETIRLGME
KSVREALDTK GMAKSQITIL DALLKLRQVC CDPHLVTLAA AKKVSNSAKL ERLMEMLPEM
LAEGRRILLF SQFTSMLKLI EAELQKRNIP WIKLTGQSQK RDALIEQFTS GAVPLFLISL
KAGGVGLNLP QADTVIHYDP WWNPAVENQA TDRAHRIGQT QSVWVVKLVA QGTIEERILG
LQERKAALAE SMYSGAVGRK QPLFSESDLA ELLKPLSV
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