| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3542 |
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| Symbol | |
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| ID | 3960409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3938028 |
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| End bp | 3939974 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637918358 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_524778 |
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| Protein GI | 89902307 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACCA CTTTTCCTCG ACTGCTGTTG AATCACGCCG CCCAGCGTCC GGGCGAGACT
GCCATGCGTG AAAAAGAGTA TGGCATTTGG CAAGCCCTGT CCTGGGCTGA TCTGGCCGTG
CTGGTGGAGC AGCTTGCTTG TGGCCTGCAT CAAGCGGGGC TGCGCCGCGA CGAACACATG
ATTGTGATTG GCGCCAACCG GCCGCGTTTG TACGCCACCA TGCTGGCCGT GCAGTCCCTG
GGGGCCGTTC CCATTCCGCT CTATCAGGAC GCCGCCGCGC CCGAGTGTGT CTTCCCCATC
AACAATGCTG ACGTGCGTTT TGCCTTTGCC GAAGACCAGG AACAGGTCGA CAAACTGCTG
GAAATCCGGG AACAGTGCCC GCAACTTTCA AATATCTACT TTGACGATCC GCGTGGCCTG
CGTAACTACG ACGAGCCGGG ACTGATGGCG GTCGATGATT TGCTGGCCGC CGGCAAGACG
TTTGCCGCCC AGCACCAAGA ATTCCTGCCA TCCGAGGTGA GCCGGATCAA GCCCGATGAT
GTGGCGGCCA TGTTTTTCAC CTCGGGTACC ACCGGCAACC CCAAAGGTGT GGTGCACACC
CATAACTCGC TGTTGAACCG GGCCAAGGCC GGAGCTGACT TTGACAAGCT GACCCACTCC
GAGGAAGTGC TGGCCTATTT GCCGCCAGCC TGGATTGGAC AAAATATTTT CAGCTACGCG
CAGTGGCTGG CTTGCGGCTA TGTGGTCAAT TGTCCGGAGT CGGCGGCCAC CGTCACGATC
GACCTGAAGG AGGTTGGCCC CACCTATTAC TTTGCACCGC CGCGGGTGTT TGAAGGCTTG
TTGACCAGCG TGATGATCCG CATGGAAGAT GCCGGCACGC TGAAACGCAA CATGTTTCAA
TTCTTCATGG GCGTGGCAAA AAGGGTCGGC CCGACGCTGA TGGATGGCAA GTCGGTGCCG
CTGAGCGACC GTGTGCTGTA CACGCTGGGC AACTTCATGG TGTATGGGCC ACTGCGCAAC
AACCTGGGCA TGAGTCGGGT GCGGGTGGCT TATACCGCGG GCGAGGCCAT CGGTCCGGAC
TTGTTCAGTT TTTATCGCTC CATCGGCATC AATCTCAAAC AGCTTTACGG CTCTACCGAG
ACGGCTGTGT TTGTCTGCCT GCAGCCCGAT AACGAAGCGC GCGCCGACAC CGTGGGTGTG
CCCTGTTCCG GGGTCGAAAT CAAGGTGGCT GACAACGGTG AAATTTTGGT CAAGTCGCCA
GGCCTGCTCA AGGGCTATTT CAAGAATCCT GAAGCCACTG CCGAGGTGTT GACGCCGGAC
GGCTGGTACC ACACCAGCGA TGCCGGTTTT CTGGATGCCC ACGGCCACCT CAAGATCATC
GACCGCGTCA AAGACGTGGG GCGCATCAAG GGGGGTGCCA ATGACGGCGC CATGTTCGCC
CCCAAGTATG TGGAGAACAA GCTCAAGTTC TTCCCGCACA TCAAAGAGGT GGTGGCCTAC
GGTGACGGCC GCGAAAAGGT CTGCGTCATG ATCAACATCG ATGTTGACGC GGTGGGCAAC
TGGGCCGAGC GGCGCAACCT GCCGTATGCC GGTTACACCG ATCTGGCGCA AAAGCCCGAG
GTCTACCAAC TCGTCAAGGA GTGTGTTGAA AAGGTGAATG CCGACCTGAG CGTGGACACG
TTGCTGGCGG GCTCGCAGGT CAGCCGCTTT CTGGTGCTGC ACAAGGAACT CGACGCCGAC
GACGGCGAAT TGACCCGCAC CAACAAGGTA CGGCGCGGCT TTATTGCCGA AAAATACGAT
GTGCTGGTGG ATGCCTTGTA TGGCGGCAAA ACATCGCAGT TCATCGAAAC CCAGGTCAAG
TTTGAGGATG GGCGCACCGG CAGCATCAGC GCGACGCTGA AAATTGAAGA TGCGAAGACA
TTTACACCCG TCAAGGCGGC AGCATGA
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| Protein sequence | MQTTFPRLLL NHAAQRPGET AMREKEYGIW QALSWADLAV LVEQLACGLH QAGLRRDEHM
IVIGANRPRL YATMLAVQSL GAVPIPLYQD AAAPECVFPI NNADVRFAFA EDQEQVDKLL
EIREQCPQLS NIYFDDPRGL RNYDEPGLMA VDDLLAAGKT FAAQHQEFLP SEVSRIKPDD
VAAMFFTSGT TGNPKGVVHT HNSLLNRAKA GADFDKLTHS EEVLAYLPPA WIGQNIFSYA
QWLACGYVVN CPESAATVTI DLKEVGPTYY FAPPRVFEGL LTSVMIRMED AGTLKRNMFQ
FFMGVAKRVG PTLMDGKSVP LSDRVLYTLG NFMVYGPLRN NLGMSRVRVA YTAGEAIGPD
LFSFYRSIGI NLKQLYGSTE TAVFVCLQPD NEARADTVGV PCSGVEIKVA DNGEILVKSP
GLLKGYFKNP EATAEVLTPD GWYHTSDAGF LDAHGHLKII DRVKDVGRIK GGANDGAMFA
PKYVENKLKF FPHIKEVVAY GDGREKVCVM INIDVDAVGN WAERRNLPYA GYTDLAQKPE
VYQLVKECVE KVNADLSVDT LLAGSQVSRF LVLHKELDAD DGELTRTNKV RRGFIAEKYD
VLVDALYGGK TSQFIETQVK FEDGRTGSIS ATLKIEDAKT FTPVKAAA
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