Gene Rfer_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3216 
Symbol 
ID3961192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3563804 
End bp3564346 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content61% 
IMG OID637918035 
Producthypothetical protein 
Protein accessionYP_524456 
Protein GI89901985 
COG category[L] Replication, recombination and repair 
COG ID[COG3663] G:T/U mismatch-specific DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAAAG ACCAACAGAG CGCTGCCATC TCGCCCCAAA CGCCACGCCT GTTCGGCTTG 
CCACCCCTCG TCTCCGAGAA CACCAGGCTG CTGGTGTTGG GCAGTTTCCC AAGCATCACC
TCGCTGGCGC GGCAGCAGTA TTACGCCCAC CCGCAAAACC AGTTTTGGCG AATTCTTCAA
GCTATTTTCC CTTCCAGCCC CCGTGGAATA AGCGCAGCTA GCTATCAAGA ACGTAGCGCC
TGGCTGCTGG CGCAAGGTCT TGGTATTTGG GATGTCTATG CCTCCTGCGA GCGCGAAGGC
AGTCTGGACA CGGCCATTCG CCAGCCACAG GTCAACGATT TCAGCGGACT CAGGCTTCGC
TGCCCGCAAC TTCAGCTGAT TGCCCACAAC GGCGGCGAGA GCTTTCGGCA CGCCAAATAC
ACCGCCACCT TGGGCCTGCC GGTGCTCAAG TTGCCCTCAA CCAGCCCGGC CAATGCCAGC
TGGAGTTTTG AGCGCAAGCT CGCGGCCTGG CGCAAGGCGG TGGCGGCGGC CGGGCTGCTC
TGA
 
Protein sequence
MVKDQQSAAI SPQTPRLFGL PPLVSENTRL LVLGSFPSIT SLARQQYYAH PQNQFWRILQ 
AIFPSSPRGI SAASYQERSA WLLAQGLGIW DVYASCEREG SLDTAIRQPQ VNDFSGLRLR
CPQLQLIAHN GGESFRHAKY TATLGLPVLK LPSTSPANAS WSFERKLAAW RKAVAAAGLL