Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3216 |
Symbol | |
ID | 3961192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3563804 |
End bp | 3564346 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637918035 |
Product | hypothetical protein |
Protein accession | YP_524456 |
Protein GI | 89901985 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3663] G:T/U mismatch-specific DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAAAG ACCAACAGAG CGCTGCCATC TCGCCCCAAA CGCCACGCCT GTTCGGCTTG CCACCCCTCG TCTCCGAGAA CACCAGGCTG CTGGTGTTGG GCAGTTTCCC AAGCATCACC TCGCTGGCGC GGCAGCAGTA TTACGCCCAC CCGCAAAACC AGTTTTGGCG AATTCTTCAA GCTATTTTCC CTTCCAGCCC CCGTGGAATA AGCGCAGCTA GCTATCAAGA ACGTAGCGCC TGGCTGCTGG CGCAAGGTCT TGGTATTTGG GATGTCTATG CCTCCTGCGA GCGCGAAGGC AGTCTGGACA CGGCCATTCG CCAGCCACAG GTCAACGATT TCAGCGGACT CAGGCTTCGC TGCCCGCAAC TTCAGCTGAT TGCCCACAAC GGCGGCGAGA GCTTTCGGCA CGCCAAATAC ACCGCCACCT TGGGCCTGCC GGTGCTCAAG TTGCCCTCAA CCAGCCCGGC CAATGCCAGC TGGAGTTTTG AGCGCAAGCT CGCGGCCTGG CGCAAGGCGG TGGCGGCGGC CGGGCTGCTC TGA
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Protein sequence | MVKDQQSAAI SPQTPRLFGL PPLVSENTRL LVLGSFPSIT SLARQQYYAH PQNQFWRILQ AIFPSSPRGI SAASYQERSA WLLAQGLGIW DVYASCEREG SLDTAIRQPQ VNDFSGLRLR CPQLQLIAHN GGESFRHAKY TATLGLPVLK LPSTSPANAS WSFERKLAAW RKAVAAAGLL
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