Gene Rfer_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3159 
Symbol 
ID3962684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3495100 
End bp3495906 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content64% 
IMG OID637917978 
Productalpha/beta hydrolase 
Protein accessionYP_524399 
Protein GI89901928 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCA CCGTCAACGG CCACAGCACC TATTGCTACA CCGGTGGGAA GACTTTCGAT 
GCCACCCAGC CCACCGTTAT CTTCATCCAC GGCGTATTGA ACGACCACAG CGTGTGGATT
TTGCAGACCC GCTACCTGGC CCATCACGGC TGGAACGTGC TCGCTGTGGA TCTGCCGGGT
CACTGCCGAA GCGCAGGCGA CCCACCGGCC ACGGTGGAAG ACGCCGCCGA CTTTGTCATC
GCCCTGATGG ATGCGGCGGA CCTGGACAAG GCCGCGCTGG TGGGCCACAG CTTTGGCTCC
CTGGTCGCGC TGGAAGCCGC CGCCCGCGCA CCGGAACGCG TTAGCCAATT GGTGCTGGTG
GGCACAGCGT TCCCCATGAA GGTGTCGCCC GCCCTGCTGG AATCCTCGTT GAAGGAGCCT
ATGCGCGCCC TGGAGATGGT CAACATCTTT TCACGCTCAA CCCTGGCGCC GCCGCCATCG
GCCCTGGGGC CGGGCACCTG GGTGTATGGC GCGTCCATGG CGCTGGGGCG CCGGGTGCTG
GCCAGCAACC CCCGCGTCAA CCTGTTTCAT GCCGGTTTCA AGGCTTGCGA CAGCTACAGT
CATGGGGAGG CGGCGATGGC GCAGGTGCAG TGCCCGGTGC TTTTTGTGTT GGGCCGCGTC
GATCAGATGA CGCCACCCAA AGCGGCGCAG GGTCTGATTA AAAAGGCGTC AAATGCCCAA
GTGGTTTACC TGCCCGGCGG GCACCACCAG ATGAACGAAA CGCCCGAGCC GATGCTGGCG
GCGTTGAACG GGTTTTTGAA ATCGTGA
 
Protein sequence
MELTVNGHST YCYTGGKTFD ATQPTVIFIH GVLNDHSVWI LQTRYLAHHG WNVLAVDLPG 
HCRSAGDPPA TVEDAADFVI ALMDAADLDK AALVGHSFGS LVALEAAARA PERVSQLVLV
GTAFPMKVSP ALLESSLKEP MRALEMVNIF SRSTLAPPPS ALGPGTWVYG ASMALGRRVL
ASNPRVNLFH AGFKACDSYS HGEAAMAQVQ CPVLFVLGRV DQMTPPKAAQ GLIKKASNAQ
VVYLPGGHHQ MNETPEPMLA ALNGFLKS