| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2479 |
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| Symbol | |
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| ID | 3962972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2730361 |
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| End bp | 2732040 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637917298 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_523727 |
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| Protein GI | 89901256 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGATT CAAAACTGAT CCTCGACTAC GTCTACGACC ACGCCGACGC GCACCCCGAC
CAGGTTTTCC TGAGTCAGCC CGTTGGCGGC GGGAAGGTGA CGGACTACAC CTGGGCGCAA
ACCGTCGATC AGGCGCGGCG CATGGCGGCG CATCTGCAAA GTCGCGGCCT GGAACGCGGC
GCACGCGTCG CCATCCTGTC CAAGAATTGC GCGCACTTCT TCATGGCCGA ATTGGCGATC
TGGATGGCCG GCTACACCAC GGTGGCGATC TTCCCGACCG AAGTCGCCGA GACCGTGCAC
TTCGTGCTGG AGCACAGCGG TGCCAGCCTG CTGTTCGTGG GCAAGCTCGA CACCTGGGAG
GCGCAGAAGC CGGGCGTGCC AGCCAGTCTG CCACGCATTG CCTTTCCGCT GGCGCCGCAG
ACCGACTACG ACACCTGGGA TGCCATCGTG GCGCGAACTG GTCCGCTCGG TGGCCGCCCG
CAACGCGGCG CCAACGAGTT GGCGATGTTG ATCTATACCT CGGGTTCGAC CGGGCAGCCC
AAGGGCGCGA TGGTGAGCTT TGGCGCCATC ACCCGCGCGG GGGAAGGTTT TTCCAACTAC
ACCCGTGAGC GCCTCGGCCG GGAAACCGAA ATCCGACTCC TGTCTTACCT GCCACTGGCG
CACAGCTTCG AGCGCTCGTG CGTCGAAGCG TCGACGCTGG TCGGCGGTGA CGCGCACGTC
TTTTTCGCCG AGGCGCTCGA CACCTTCCTG ACGGACCTGC AGCGTGCACG GCCGACGGTC
TTCATCTCGG TGCCGCGGCT GTGGCTCAAG TTCCAGCAGG GCGTCTTCGC GAAGATGGCG
CCGGAAAAGC TCGATCGATT GCTCGGCATC CCGATCCTCG GGCGCATCGT CGCGAAGAAG
GTGCTCAAGG GTCTGGGGCT GGATCAGGTC CGCAATGCGG CCAGCGGGTC GGCGCCGATC
CCGCCCGACC TCATCGCCTG GTACCGGCGC CTCGGCCTGA AACTGTACGA GGGCTACGGC
ATGACCGAGG ACAATTCGTT CTCGCACGGC TCGAACGAGA AGTTCAACGA GCCCGGTTAT
GTCGGGGTGG CGATGCCCGG CGTGCAGGTA CGCATCAGCG ACGAAGGCGA GATCCTGATC
AAGTCGCCCG GGCAGTTCAG CGGCTATTAC AAGCAGCCGG AGCTGACGGC GGCGTCGTTC
ACAGAGGACG GTTTTTTCCG TACCGGCGAC CTCGGCGAGT TGAGGGCCGA CGGGCTGCTC
AAGATCACCG GCCGCGCCAA GGAGCTGTTC AAGACGGCCA AGGGCAAGTA CGTGGCACCG
GCGCCGATCG AGAACCTGCT TAATGCGCAT CCGATGGTCG AGCTGTCGCT GGTGTCGGGC
GTCGGTCAGC CTTCTGCCTA TGCGATGGTG GTGCTGGCCG AAAGCCTGCG CCCGCAAATG
GGTGACCCGA ATGTTCGAGC GAGAGTGCAG GACGAGCTGG GCCAGTTGCT TCAGGACGTG
AACCAGCAGG TGCCTGAATA TGAACACCTG CGCATGATCG TCGTGGCACG CGAGCCCTGG
TCGATCGAAA ACGGCTGCCT CACGCCGACC ATGAAAATCA AACGCGGTCG CATCGAAGCG
GCGGTGGCGG CCCAGGTAGA GGTCTGGTAC ACCGGCCGCG GCCCGGTTCA TTGGGCTTAG
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| Protein sequence | MPDSKLILDY VYDHADAHPD QVFLSQPVGG GKVTDYTWAQ TVDQARRMAA HLQSRGLERG
ARVAILSKNC AHFFMAELAI WMAGYTTVAI FPTEVAETVH FVLEHSGASL LFVGKLDTWE
AQKPGVPASL PRIAFPLAPQ TDYDTWDAIV ARTGPLGGRP QRGANELAML IYTSGSTGQP
KGAMVSFGAI TRAGEGFSNY TRERLGRETE IRLLSYLPLA HSFERSCVEA STLVGGDAHV
FFAEALDTFL TDLQRARPTV FISVPRLWLK FQQGVFAKMA PEKLDRLLGI PILGRIVAKK
VLKGLGLDQV RNAASGSAPI PPDLIAWYRR LGLKLYEGYG MTEDNSFSHG SNEKFNEPGY
VGVAMPGVQV RISDEGEILI KSPGQFSGYY KQPELTAASF TEDGFFRTGD LGELRADGLL
KITGRAKELF KTAKGKYVAP APIENLLNAH PMVELSLVSG VGQPSAYAMV VLAESLRPQM
GDPNVRARVQ DELGQLLQDV NQQVPEYEHL RMIVVAREPW SIENGCLTPT MKIKRGRIEA
AVAAQVEVWY TGRGPVHWA
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