| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1690 |
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| Symbol | |
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| ID | 3960702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1818846 |
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| End bp | 1819451 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637916514 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_522951 |
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| Protein GI | 89900480 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.805804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAAAC GAAATGCTCT TAAATTAATA GCTATTTACG CCCTATTGAC GGGGGCTATC
GGCCTTATTC CTGCCTGTTC CAAACAGGGG CCGAGTTTTG CCGGAATTGA CCTCACCGGT
GCCGATTACG CCAAAGATTT CGCCTTGACC GACCACAATG GCCAGCCCAG GACCCTCAAG
GATTTTGCCG GCAAGGTGGT GGTGATGTTC TTCGGTTATG TGCAGTGCCC GGATGTCTGC
CCCACCTCGA TGGCTGAACT GGCCGAGGTG AAGCGCTTGT TGGGCAAGGA TGGCGAACGC
GTGCAGGGTT TGTTCGTCAC GGTCGATCCA GCGCGTGACA CCCCCGAGGT GCTCAAAGGC
TATATGGCAG CCTTTGATCC GACCTTTCTG GCGCTCTACA CCACGCCGGA AAAACTGGCT
GTGCTGGCCA AAGACTACAA GGTCTATTAC AAAAAAGTGG AGGGTCCCAC GCCCACCAGC
TACTCCATGG ATCATTCGGC GGGCAGCTTC GTGTACGACA CGCAGGGCAA GTTGCGTCTG
TATAACCGCT ATGGCAGCGG CGCTGCGCTG CTTGCGGCCG ACATCAAGCT CTTGCTGCAG
CAGTAG
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| Protein sequence | MNKRNALKLI AIYALLTGAI GLIPACSKQG PSFAGIDLTG ADYAKDFALT DHNGQPRTLK
DFAGKVVVMF FGYVQCPDVC PTSMAELAEV KRLLGKDGER VQGLFVTVDP ARDTPEVLKG
YMAAFDPTFL ALYTTPEKLA VLAKDYKVYY KKVEGPTPTS YSMDHSAGSF VYDTQGKLRL
YNRYGSGAAL LAADIKLLLQ Q
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