| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1240 |
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| Symbol | |
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| ID | 3961230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 1335167 |
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| End bp | 1336648 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637916054 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_522505 |
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| Protein GI | 89900034 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.554345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGTTA ATCCAGAATC ATCGGTCAGC TCGAAAATAA AAGAGGCTGG TCGCCATTCC
ATTGTGTATG GTTTGGGCAG TGTTGCCCAA TCGGCGGTCG GTTTCGTATT GCTGCCAATT
TTGACGGGTG CTTTAACCAA AGAAGATTTT GGGGTTTATT CCTTGATCTT GATGGCCAGT
GCAGTAGCTG GTGCCATTTT CTATCTGGGC ATGACCTCAG CTCTGCCAAG ATCATATTTT
GACTATCAGT CTGCAGATGA TCGACGAGCA GTGTTCACAA CCGCTTTTGT TATTTTGCTG
GGTGGTGCAT TAATTCAAAG CGGAGTCGGT TATTTTGGCG GACAACTCAT TTCAAAAGCC
TTGGTGGGTC GTAACAATTA TTCAATACCA ATAGCTTGGG CTTTTTTGGG GAGTGCTATT
GGATTTGTCA ATCAATATTT TTTTAGTTAC CTCAGAATTT TGCGCAAATC AACAGCTTCT
GTCATATTCA GTTTAATCGG CTTGCCTGGT GGAATTGGTC TGACGCTATG GTTACTTGCA
CGTTCGCCGG GTGACTTGGC CGCGCCTTTT GAGGCTCTTG CCTGGTCACA GCTTGCCATT
ATGCTCATAT TCATTGGCTT TTTCGGCAAA GAAGCCTTCA CGTTTCGCAT TCAAAAAGAG
GAACTGTCCC GGCTTATCCC GTTTGGCGTT GGCTCTGTTG TTGCTAGTTT TGGCGGTATT
TTGCTGGATT GGGCTGATCG ATTGATTATT GAACATTTTT TGACCCTTGC TGACGTGGGC
AGCTATTCAG CCGCTTTTCG AATTGGTACG CTCATTAATA TCATACTTAT TTCGCCATTC
AGCCAAATCT GGTCACCCAT GATGATGGAA TACCGTACTC ATGACAATAT CAAAGAACTA
TTCACCAAAG TTTTTTATTA TTTTATGATG ATTGGCACGG TGACACTGGC TGGAGCTTCA
CTTTTTATGG GCGATATTTT GCCATTATTG ATACGGTCAG AAATAAGTCA TCAAATGATC
AGCGTGATAT TGCTGGTCAT GCTCGGAACA CTGATCTATG GCTGCACCAA TATTGTAGCG
GCAGGGTTAT TGTACGAGCG CAAGGTTGCT CAAGTATCTT ATGTTTACTA TACTGTTGCC
GGTATTAAAA TTGGGGTCAA TTTACTGATT ATTCCAGTTT TTGGCATAGT CGGGGCTGCT
GTTACCACCT TGCTTGCAAG CGTTATGATA CCTACGGGTA TTTATGCATT GGCACGCAAG
TACTTTTCAT TTATTATTGA TTGGAAAAGA TTGGCGTTGT TGGGATTTAA TTTGTTACTA
CCGCTGGTGT ATGGATTATT TTATTTTTCA GAATACCCGA TTGCATTGCC GCTTCGAATC
ATCTGGTTTT TTGTATTCTG TATATTGATT TATTTCACAT GCTTCTCAAG TGATGAAAAA
GTTCAGTTGA AAAATGTAGT TCTCCAATTT GTACCCAGTT AG
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| Protein sequence | MNVNPESSVS SKIKEAGRHS IVYGLGSVAQ SAVGFVLLPI LTGALTKEDF GVYSLILMAS
AVAGAIFYLG MTSALPRSYF DYQSADDRRA VFTTAFVILL GGALIQSGVG YFGGQLISKA
LVGRNNYSIP IAWAFLGSAI GFVNQYFFSY LRILRKSTAS VIFSLIGLPG GIGLTLWLLA
RSPGDLAAPF EALAWSQLAI MLIFIGFFGK EAFTFRIQKE ELSRLIPFGV GSVVASFGGI
LLDWADRLII EHFLTLADVG SYSAAFRIGT LINIILISPF SQIWSPMMME YRTHDNIKEL
FTKVFYYFMM IGTVTLAGAS LFMGDILPLL IRSEISHQMI SVILLVMLGT LIYGCTNIVA
AGLLYERKVA QVSYVYYTVA GIKIGVNLLI IPVFGIVGAA VTTLLASVMI PTGIYALARK
YFSFIIDWKR LALLGFNLLL PLVYGLFYFS EYPIALPLRI IWFFVFCILI YFTCFSSDEK
VQLKNVVLQF VPS
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