Gene Rfer_1059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_1059 
Symbol 
ID3963755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp1126795 
End bp1128345 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content61% 
IMG OID637915880 
ProductN-6 DNA methylase 
Protein accessionYP_522331 
Protein GI89899860 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCACTG GCGAACTACG CAGCCAAATC GACGCCATCT GGAATTCGTT CTGGACCGGC 
GGCATCTCCA ACCCACTGGA GGTGATGGAG CAAATCACAT ACCTGCTTTT TCTGCGCCGC
CTGGACGACC TGCACACCCT GGAAGAAAAC AAGTCGGTGC GGCTGGGCAA GCCGATGGAA
CGCCGCACCT TCCCCGAGGG CCCTGACACC AAGGGCCGCG ACTACAACGA TCTGCGCTGG
TCGCGCTTCA AGAACTTCGC GCCAGCCGAG ATGTACACCG TGGTGGGGGA GCATGTGTTT
CCGTTCCTGC GCAGCATGGG CGGCGACGGC TCGACCTACG CCCACCACAT GAAGGACGCG
CGCTTCACCA TCCCGACCCC GGCCCTGCTG GCCAAGGTGG TGGACCTGCT CGACCATGTG
CCGATGGAAG ACCGCGACAC CAAGGGCGAC CTCTACGAGT ACATGCTTAG CAATATTGCC
AGCGCCGGAC AGAACGGCCA GTTCCGCACG CCGCGCCACA TCATCCGCCT GATGGTGGAA
ATGACGGCTC CGACCGCCAA AGACGTGATT TGCGACCCGG CGAGCGGCAC CTGCGGCTTT
TTGGTGGCTA CCGGTGAGTA CCTGCGCGAG AAGCACCCGG AAATCCTGCG CAACCCCGCG
TCGCGCGAGC ATTTTCACCA TGGCATGTTC CACGGTTTCG ACTTTGACAA CACCATGCTG
CGTATTGGCA GCATGAACAT GGCGCTGCAC GGCGTTGACA ACCCTGACAT TCGTTACCAG
GACTCGTTGG CGCAGGACCA TGCCGGTGAT GAGGGCCGGT ATTCGCTCAT TCTGGCGAAT
CCGCCGTTTG CTGGTTCCCT GGACTACGAG AACACGGCCA AAGACCTGCT GGCCATCGTC
AAGACCAAGA AGACCGAGCT GCTTTTCTTG GCGCTGTTCC TGCGCCTGCT CAAGCCCGGT
GGGCGGGCTG CCGTCATTGT GCCGGACGGC GTTCTGTTTG GCTCCAGCAA GGCGCACAAG
GAGCTGCGCC GCATGATTGT CGAAGAGCAA AAGCTCGATG CCGTCATCTC GCTGCCCTCG
GGCGCGTTCA AGCCCTATGC CGGGGTCTCG ACCGCCATCC TGCTGTTCAC CAAAACCAAC
TCGGGCGGCA CCGATAACGT CTGGTTCTAT GACATGAAGG CCGATGGCTG GAGCCTGGAC
GACAAGCGCC AGCCGCTGCT CTCTGATGAT AAATTGAGCC TCCAGCCCTT TCAGGACGGT
CATAGCCAGT TATCAGAAGC GGAGCACACC AAAAACAACC TGCCTGATGT GCTGGCGCGC
TGGGGTCAGC GGGCCTCCTC TGAACTGGAA CGCGACCGCA CCGAACAGAG TTTCTGTGTG
CCCAAGGGCG ACATTGTCGG CAACGACTAC GACTTGTCCA TCAACCGCTA CAAGGAAGTG
GTCCACGCCG TCAGCGAGCA TCTGCCGCCA AAGGAGATTC TGGCCAGGCT GGCGGTGCTG
GAGGCGGAAA TTCAGGCGGG GATGAAAGAG CTTGCGGGGA TGCTCGGATG A
 
Protein sequence
MLTGELRSQI DAIWNSFWTG GISNPLEVME QITYLLFLRR LDDLHTLEEN KSVRLGKPME 
RRTFPEGPDT KGRDYNDLRW SRFKNFAPAE MYTVVGEHVF PFLRSMGGDG STYAHHMKDA
RFTIPTPALL AKVVDLLDHV PMEDRDTKGD LYEYMLSNIA SAGQNGQFRT PRHIIRLMVE
MTAPTAKDVI CDPASGTCGF LVATGEYLRE KHPEILRNPA SREHFHHGMF HGFDFDNTML
RIGSMNMALH GVDNPDIRYQ DSLAQDHAGD EGRYSLILAN PPFAGSLDYE NTAKDLLAIV
KTKKTELLFL ALFLRLLKPG GRAAVIVPDG VLFGSSKAHK ELRRMIVEEQ KLDAVISLPS
GAFKPYAGVS TAILLFTKTN SGGTDNVWFY DMKADGWSLD DKRQPLLSDD KLSLQPFQDG
HSQLSEAEHT KNNLPDVLAR WGQRASSELE RDRTEQSFCV PKGDIVGNDY DLSINRYKEV
VHAVSEHLPP KEILARLAVL EAEIQAGMKE LAGMLG