Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_0327 |
Symbol | |
ID | 3961288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 326141 |
End bp | 327445 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637915159 |
Product | lytic murein transglycosylase |
Protein accession | YP_521612 |
Protein GI | 89899141 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAACAA CTCCCTATTT TTTCGCACCC GCTGGCCACG GGCTGGTTCC GGCTTTGCTG GCCATCCTGG CGCTTGCGGG TTGCGCCTCC ACACCATCGG TCGAGCCCGG GGCAGCGGCA CCATCGACGA CCTCTGCTAA CCCTACACCA GCCGGTGCGA CACCTGCCAC ACTCGACGCG GTTGAAAACA GCCAGAAGTT TGCCCGTTGG GTGGCCGAAT TCAGCGCCAC CGCGCGCACG GCTGGCATTG ACGAGGCCAC GCTGCATATC GCGTTCGACA ACGCCCGCTT CCTGCCACGC GTCATCGAGT CGGACCGTGC GCAGCCCGAG TTCACCCGCA CACCGTGGGA CTACCTCGAT ACCGCCGTGT CGGCGCTGCG CGTCACCCGT GGGCAAGACA AGCTGCTGCA ACTGCGGCAG CAAATCGACC CTATCGCCGT GCGCTACGGC GTGCCGACCG AGGTGCTGCT CGCGATCTGG GGCATGGAGA GCAGCTACGG CAGTTTTGTG GGCGACCTAC CCACCATCGA CGCCCTGGCG ACGCTGGGCT TTGAAGGCCG ACGCGAGGCA TGGGCGCGCA ACCAATTGCT GGTTGCTTTG AAGATCTTGC AGAGCCACGA CATAGTCCGC GTGCAGATGG TGGGCTCATG GGCGGGTGCC ATGGGCCAGA CGCAATTCCT GCCCTCGGTC TTCCTGGCCT ACGCGGTCGA TGCCGATGGC GATGGCCGAC GCGACATCTG GGGCAGCGTG CCCGATGTGA TGGCATCCAC CGCCAACTTT TTGGTCGGCT CCGGTTGGCA GGCCGGTCAG CCCTGGGGGG CCGAGGTGCG CTTGCCGCCG GGATTCGACT ACGCGCGCAC CGATGCCGAT GTGCGCCAGC CCACCGCCGC ATGGGTAGGC GCGGGCGTGC AGGCCATGGA CGGCACAGTG CTGCCAAGCT TTGCCGACGG CTCCATCCTG CTTCCGGCTG GCGCGCGCGG GCCAGCCTTT CTGGTCGGCA GCAACTTCCG CACCATCCTG CGCTACAACA ACTCCACCAG TTACGCGCTC GGTGTCCACC TGCTGGCGCA GCGGCTGGCC GGTGGCCCCG CGATCCAGGC CGCCTGGCCG CGCGACCTGC ACGCCCTGAC GAGTGACCAG ATGCTGGCGC TGCAAACGGC GCTGAATGCG CGCGGCTTCG ACAGCGGTAC GCCCAACGGC AAGATGGGCC CGGCCACGCA GCGCGGCATT CGCCGCTACC AGCGCAGCCT GGACCTGCCG ACGGATGGTT ATCCGACGCT GGACTTGCTG CAGCGTCTGC AGTGA
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Protein sequence | MATTPYFFAP AGHGLVPALL AILALAGCAS TPSVEPGAAA PSTTSANPTP AGATPATLDA VENSQKFARW VAEFSATART AGIDEATLHI AFDNARFLPR VIESDRAQPE FTRTPWDYLD TAVSALRVTR GQDKLLQLRQ QIDPIAVRYG VPTEVLLAIW GMESSYGSFV GDLPTIDALA TLGFEGRREA WARNQLLVAL KILQSHDIVR VQMVGSWAGA MGQTQFLPSV FLAYAVDADG DGRRDIWGSV PDVMASTANF LVGSGWQAGQ PWGAEVRLPP GFDYARTDAD VRQPTAAWVG AGVQAMDGTV LPSFADGSIL LPAGARGPAF LVGSNFRTIL RYNNSTSYAL GVHLLAQRLA GGPAIQAAWP RDLHALTSDQ MLALQTALNA RGFDSGTPNG KMGPATQRGI RRYQRSLDLP TDGYPTLDLL QRLQ
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