Gene Rfer_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0256 
Symbol 
ID3961158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp253580 
End bp254734 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content58% 
IMG OID637915091 
ProductNHL repeat-containing protein 
Protein accessionYP_521544 
Protein GI89899073 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAACT CATCAACGAC CATGTTCCTG CCTACTCGAC TACGATTTTT CAGTGCACTG 
CTCGGCGCGC TTATGCTGCT GTCCGGCTGC GTCACGCAGC CTACCAAAGC ACCGCTGCAA
AAAGAGGCCG TGTTCTACCC GCGAGCGCCG GATGCGCCGC GCGTGCAGCA TCTGGCCACT
TTTGCCAGCG CGCGCGATCT GGAAACCGCC AAAGAAAGTG GTGGGCTCAA GGATTTTCTG
CTCGGCGAAG AAAAAGTCGA GGACGCCTTG GTGCGTCCTT ACGGCGTGGC GATGTCCGAT
AGCAAGATCT ACGTCGCCGA TAGTCGAGGC CCCGGCTTGG CGGTTTTTGA CCTCAAAACC
AGAAAATTTT CACTCATGTC GGGGTCGGGT GCTGGACGCA TGCAGCGCCC CATCAATGTA
GCCATCGACG CAGACGATAC CAAGTACGTG ACTGACACCG CGCGTAATCA GGTACTGGTC
TATGACAAGG GCGACCGTTA TCTTGCAGCC TATGGCGGCA AGGATGAGTT CAAGCCGGTC
GATGTCGCGA TTGCCGGCGA TCGGCTGTAT GTGGTGGACA TCGAGCACCA TGAAGTCCAG
GTGCTGGACA AGCGATCGGG GAAACTACAG TTCAAATTTG GCAAGTCCGA TGTTGATAAA
GAGAAGTCAT TGCATCAACC GACCAATCTT GCCGTTGGCC GCGACGGGGA CATCTATGTT
GTCGAAACCG GAAACTTCCG CGTTGCGCGT TTCACGCCCG AGGGTAAGTT CGTGCGCCAT
TACGGCGAAG CGGGTCAGGC GCCGGGGCAG TTTGCACGGC CCAAGGGGAT CGCGATGGAC
CGCTCCGGTC GCATGTACGT CAGCGATGCG GCATTCCAGA ATGTGCAGAT CTTCGACGGT
CAGGGGCGTG TGCTCATGGC TTTCGGGCAG CCAGGGGGGG ATTTGCCCGG TCTCAACCTG
CCAGCAGGTG TTGCCATCGA TTACGACAAC GTGGCGCTGT TTCGCAGCCT CGCAGACCCC
AAATTTTCCA TCGAGCACCT GATTCTGGTC GTGAGTCAAT TTGGGCCCAA CCAGGTTGAC
GTCTTCGGTT TCGGAAAAAT GGCCGGTGTT GACTATCCCC AGGACGAGAA GCTCGAATCC
AAACCGGTCC CGTGA
 
Protein sequence
MPNSSTTMFL PTRLRFFSAL LGALMLLSGC VTQPTKAPLQ KEAVFYPRAP DAPRVQHLAT 
FASARDLETA KESGGLKDFL LGEEKVEDAL VRPYGVAMSD SKIYVADSRG PGLAVFDLKT
RKFSLMSGSG AGRMQRPINV AIDADDTKYV TDTARNQVLV YDKGDRYLAA YGGKDEFKPV
DVAIAGDRLY VVDIEHHEVQ VLDKRSGKLQ FKFGKSDVDK EKSLHQPTNL AVGRDGDIYV
VETGNFRVAR FTPEGKFVRH YGEAGQAPGQ FARPKGIAMD RSGRMYVSDA AFQNVQIFDG
QGRVLMAFGQ PGGDLPGLNL PAGVAIDYDN VALFRSLADP KFSIEHLILV VSQFGPNQVD
VFGFGKMAGV DYPQDEKLES KPVP