Gene Rfer_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_0230 
Symbol 
ID3960136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp229420 
End bp230013 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content58% 
IMG OID637915065 
Producttranscriptional regulator 
Protein accessionYP_521518 
Protein GI89899047 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGC AAACTACAGC GTCTGCGGAC GCCCAAAAAA TGGGGCTGGG CATGCAGGTG 
CGGCAGCGGC GACGTATCAA GGGCCTTACC TTGACTGAAC TGTCGCAACA GTCGGGGCTG 
TCAGTTGGCT TGCTCAGCCA AATCGAGCGT GGCCTCTCGT CACCCTCCTT GAAATCGATG 
ACGCAGATCT GCACCGCTTT GGGGGTCCCG TTGAGTTGGC TCTTTGACAA TGGTCCGTTG 
GAAAACCCGG CTGAAAAGGG CCTGGTTGTC CGGCGAGGCT CACGCCGGCG TCTCGATCTT 
GGGACTTACG GCGTGACGAA GGAACTCCTT TCGCCTGATC TGGGAGGCGA GATGCAGATT 
TACCTCGTGT CGATCCGACC GGGCGGACAA TCTGGACCGG AGACTTACAC ACACCGCGGC 
GAGGAAGGCG GCCTCGTGCT CACCGGCACA CTGGAACTCA CCGTCGATGA CCGCATCGTC 
CTTTTGTATG AGGGAGACTC CTTTCGTTTC CGCAGTTCCC TGGCGCACCG TTTCGCCAAC 
CCTGGAACCA CTCAGGCAAA CGTGGTGTGG GCAAATTCAC TGGCTTTTTA TTGA
 
Protein sequence
MKKQTTASAD AQKMGLGMQV RQRRRIKGLT LTELSQQSGL SVGLLSQIER GLSSPSLKSM 
TQICTALGVP LSWLFDNGPL ENPAEKGLVV RRGSRRRLDL GTYGVTKELL SPDLGGEMQI 
YLVSIRPGGQ SGPETYTHRG EEGGLVLTGT LELTVDDRIV LLYEGDSFRF RSSLAHRFAN 
PGTTQANVVW ANSLAFY