| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_0022 |
|---|
| Symbol | |
|---|
| ID | 3960451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 23927 |
|---|
| End bp | 24616 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637914861 |
|---|
| Product | Crp/FNR family transcriptional regulator |
|---|
| Protein accession | YP_521315 |
|---|
| Protein GI | 89898844 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTGTC AGCCGCAAGC CCGCGCAGCC GCAAACGTGA TGATGGCCAC CGCCCTGCGA
CCGACCGAAC TCTATCCCGC GCTGGCGCAA GTGCAGCCGT CCCTGGCCGA GCTGGGTCCG
GGCGCGGCGC CCATGAGCGT GCCGGCTGGC ACCGTTTTAT TCAGTGAAAA CACGCCCTGC
CAGGGCTTCC CGCTGGTGCT GGGCGGCGAG ATCAAGGTCT CGCGCAGTTC GGGTGACGGC
CGCGCGCTGG AACTGTACCG GGTCGTGGCG GGCGAGTTGT GCCTGGTGTC GTCGAGCTGC
CTGTTTCGCT CACAACCCCT GTCGGCGCAC GGCATCACCA CCCAAGCCAG CACCCTGATG
CTGATTGCGC CCGACATTTT CCGGCGCTGG CTCGAAACCC CGGCTTTTCG CAACGAAGTG
CTGGGCCTGT TTGCCGAGCG CATGGCGGAC CTCACCAGTT TGATTGACGC GGTGGCGTTT
CACAAGCTTG ACCGGCGCCT CGCCGCCGCG CTGCTGGGCC ACGGCCAGCA GCGCAAGGTC
ACGCACCAGA TGCTGGCCGA TGAACTGGGC ACCGTGCGCG AGATCGTGAC CCGCTTGCTG
CGTCGCTTTG AGCGCGAGGG CTGGGTGACA CTGGGGCGCG AGCAGATACA GATCGTCGAT
GGCGCGGCCC TGCGTGCGCT GGGCAACTGA
|
|---|
| Protein sequence | MLCQPQARAA ANVMMATALR PTELYPALAQ VQPSLAELGP GAAPMSVPAG TVLFSENTPC
QGFPLVLGGE IKVSRSSGDG RALELYRVVA GELCLVSSSC LFRSQPLSAH GITTQASTLM
LIAPDIFRRW LETPAFRNEV LGLFAERMAD LTSLIDAVAF HKLDRRLAAA LLGHGQQRKV
THQMLADELG TVREIVTRLL RRFEREGWVT LGREQIQIVD GAALRALGN
|
|---|
| |