Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3432 |
Symbol | |
ID | 3935906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3479802 |
End bp | 3480827 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637905806 |
Product | hypothetical protein |
Protein accession | YP_511374 |
Protein GI | 89055923 |
COG category | [S] Function unknown |
COG ID | [COG2357] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000798174 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAATT TCGTAAAGCC AATCCACACA AAAAGTCGGA TAAGATCTGC TGGCAAGAGA ATCGTCAAGG GTAACGACAC ACTTGACGAT AACCTAGTTC TGGAAAACTT TAGAGGCTCC CACGCATATA TCTTAAACAC TTTTCAGGCA AATATTCGGA ACCACTCAAG AGGGATAGTG CAATCTATCG GCCAACGCTT AAAGCGCCGA AATACGATTA TCGACAAAAT GCGGCGGGAA CCAAACATGC CGCTCGTGGC GATGCATGAT ATCGCAGGGT GCCGTATGGT GTTTAATTCA CTTGATGACC TTCGAGCAGT TAGAGAATCA ATGCACGGCG CAAGGTGGCG TCATTCTCTC ACCCATGAAC TCGATAAATA CGACTATATA TTGCGCCCAA AATCGACAGG ATACCGAGGC ATTCACGATG TATACGAATA CAAGGTGAAT TCGGTCGGCG GTGTGCCTTG GAACGGTCTC AAGGTTGAAA TTCAATACCG GACACTTCCA CAGCATGCCT GGGCCACTGC CGTCGAGGTA GCAGATTTAA TTACCTCCAA CCGGATAAAA TTTGCGGATG CAACTCAACA CTATCTGAGA TATTTTCAAC TGGCTAGTGA AGTAATTGCT AGAACATCTG AAGGATCAGC ATCTTGCTGC GCGGAATTAA CGAATGCTGA ATTAAAGCTG GAGTTCGATC AAGCGGATCG CCGCCTTGGG CTACTTCAAA CCTTTGACAA TCTGCGAGGA ACATCCGGGC AAGCATTGCA ATTTCGCCGA AACACACTTT TGATTTTTCG TTTTGACGTG GGTGAAGCAG AAGACGCTTT GGAATTAAGA ACTTTTGAGA ATGTGAATAG AGCGATCGAA GCATATGACG AACTCGAAAA GGAGTTCGGA GATCGGGCCG ACATTGTTCT TGTCCGGGGC GAAAGTGAGG CAAACATTAG AGATGCTTTT CGGAACTATT TTTCCGATGC TAGAGCATTC GTTGACTTGG TAAGAAACGG TCTAGCTGAT CTTTAA
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Protein sequence | MVNFVKPIHT KSRIRSAGKR IVKGNDTLDD NLVLENFRGS HAYILNTFQA NIRNHSRGIV QSIGQRLKRR NTIIDKMRRE PNMPLVAMHD IAGCRMVFNS LDDLRAVRES MHGARWRHSL THELDKYDYI LRPKSTGYRG IHDVYEYKVN SVGGVPWNGL KVEIQYRTLP QHAWATAVEV ADLITSNRIK FADATQHYLR YFQLASEVIA RTSEGSASCC AELTNAELKL EFDQADRRLG LLQTFDNLRG TSGQALQFRR NTLLIFRFDV GEAEDALELR TFENVNRAIE AYDELEKEFG DRADIVLVRG ESEANIRDAF RNYFSDARAF VDLVRNGLAD L
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