| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3299 |
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| Symbol | |
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| ID | 3935772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3353049 |
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| End bp | 3353663 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637905672 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_511241 |
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| Protein GI | 89055790 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.168419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAA GCCTGACCGA CCGTATCCTT GCAGCGCAGC CCGATCCCAA GGCGGCGGCT
GTCCTGAAGG CCGGATACGA GACGTTCCTG CAATTTGGCC TCAAGCGCGC CGCGATGCAG
GATATCGCGG ATCGGGCGGG CATGAGCCGC GCCGCGCTCT ACCAGCATTT CCGCAACAAA
GATGACATCT ATGCCGCGAT GATGGCGGGG TATTTTGCCG CCGCTGCCGA AGCGGTGGAG
GAGGCACTGG CCTCTGACCC CGATCCGGCC CGCGCGCTTT CGGCCGCGTT TGAGGCGCAG
ATCGGCGACG CGGCCGAGGG CCTGATGCGC AGCGCCCATG CGCCCGAGTT GTTCTCCGAC
ACCCATGCAA AAGCCGCCGC AATCATGGCG GAGGGCACGC TGACCCTTGC CCAGATCTAT
GCGCGGTGGA TCGACCAAGG GGTTCTGGCG GGCCGGATCG CGCCGGATGC CGTGGCGGGC
AGTTCCCTGC GCATGGCGCA GGTGATGCTG GCGGGGTTTG ACGGGCTCAA GGGTCTGTCG
GGCGACTGGC CCGCATATCT GGACGCCCGC CGCCATCTGG CGCGGATCTA TGCCCGCGCC
CTGGCCGTTT CTTAG
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| Protein sequence | MTQSLTDRIL AAQPDPKAAA VLKAGYETFL QFGLKRAAMQ DIADRAGMSR AALYQHFRNK
DDIYAAMMAG YFAAAAEAVE EALASDPDPA RALSAAFEAQ IGDAAEGLMR SAHAPELFSD
THAKAAAIMA EGTLTLAQIY ARWIDQGVLA GRIAPDAVAG SSLRMAQVML AGFDGLKGLS
GDWPAYLDAR RHLARIYARA LAVS
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