| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3002 |
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| Symbol | |
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| ID | 3935472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3021889 |
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| End bp | 3023637 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905372 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_510944 |
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| Protein GI | 89055493 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.728985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.47011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGTAA GCTTTCTTGG CGTCGAGGCA TCGCTGACCG GCCGCCGCTG GATCGGCCCC
TCCGACGATG TGGAACGCCT GGCCCAGACA CTGATACAGC GCGCCGACCT GGACCCTGCC
GTCGCAGCGA TCCTCGCGCG TCGTGGCGTG CAGCCCGACG ACGTTGCGAG CTTTCTGGCC
CCCGCCCTTC GCGATTTGCT GCCGGACCCG ATGAGCCTGA AGGATATGGC CCCTGCGGCC
ACACGGTTAG TGGAGGCCGC CCGAAAAGGG AAGCGTATCG CGATTTTCGC CGACTATGAC
GTGGACGGCG GATCTTCTGC CGCGCTGCTG ATCTGGTGGC TGCGCGCGCT GGGGCGGCAG
GCGACGCTCT ATATTCCGGA TCGGATTGAT GAAGGTTATG GCCCGAATGA TGAGGCGATG
GCCGCGCTTG CCCGCGGCCA CGACCTGATC ATCTGCGTTG ATTGCGGCAC GTTATCCCAT
GGCCCTATTG CGGCGGCCAA GGGCGCGGAT GTGATGGTTC TAGACCACCA TCTGGCAACG
GCAGAGCTGC CTGAATGTGT GGCCGTCGTG AACCCCAACC GCCAGGACGA GGATGGCGCG
AGCGGGCATC TGTGTGCGGC AGGCGTCGTG TTTCTCGTGC TGGTCGATGC CAACCGTCGG
ATGCGGGAGG CGGGCGAGCA GGGCCCGGAC CTGATGGGTT TGCTTGACCT GGTGGCCCTT
GCCACTGTGG CTGATGTGGC GCCATTGATC GGTGTGAACC GCGCGCTGGT GGTGCAGGGG
CTGAAGGTGA TGGCCAGACG GCAACGCCCG GGCCTCGTGG CCCTGTCGGA TGTGGGGCGG
CTCGATCGCG CGCCGACGTC CTATCACCTA GGCTTCGTTC TTGGACCCCG TGTGAATGCA
GGTGGGCGCA TCGGAGCAGC AGATTTGGGC GCGCGATGCC TTTCGACTGA CGACATGGCC
GAAGCCGTGA AATTGGCGGC GCAACTGGAC ACGCTCAACA CCGACCGCCG CGAGATTGAG
CAGCGCGTGC GTGAAGCCGC GCTGGTACAG GCGGAGGCAC GTGGGCTGGA AGCCCCGCTG
GTCTGGGCCG CCGAGGACGG CTGGCATCCG GGGGTCGTGG GCATTGTTGC CAGCCGCCTG
AAAGACCACA CGCGCCGCCC CGCCATTGTC ATCGGTTTTG ACGGAGACGA CGGCAAAGGT
TCGGGTCGCT CAATGGCGGG GGTCGACCTT GGGGCGTCAA TCCAGAAACT GGCCGCCGAA
GGGCTGATCC AGAAGGGCGG CGGTCACAAG ATGGCCGCCG GTCTGTCGCT GTCGCGCGCG
CAACTTGAAC CCGCCATGGA GCGCCTGACG GAGCTTTTGG CCAAACAAGG TGCTGGCACT
GGCGGACCTG CGGACCTGCG TCTGGACGGA ACCATCATGA CCTCCGCCGC GACGCCTGAG
TTGATCGAGA AAATCGAGGC GGCCGGTCCC TATGGCGCAG GCGCCCCTGC CCCCCGCTTC
GCCCTGCCCG CCCTGCGCAT CCGCCATACA AGACCCGTGG GCGAGACCCA CCTGAAACTG
ACGCTCGGCG ATGGCGGCCC GGTCACGATA GATGCTATCT GCTTTGACGC CGTCCGCTCG
GGCCTCGATG AATTGCAGGC CCATAATGGT CGCAGCGTCC ATGTGGCAGG ACGGGTGGAG
CTGAACCACT GGCAAGGCCG CACGCGGGTT CAATTGCGCC TAGATGACGC GGCTTGGGCC
GACGAGTGA
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| Protein sequence | MSVSFLGVEA SLTGRRWIGP SDDVERLAQT LIQRADLDPA VAAILARRGV QPDDVASFLA
PALRDLLPDP MSLKDMAPAA TRLVEAARKG KRIAIFADYD VDGGSSAALL IWWLRALGRQ
ATLYIPDRID EGYGPNDEAM AALARGHDLI ICVDCGTLSH GPIAAAKGAD VMVLDHHLAT
AELPECVAVV NPNRQDEDGA SGHLCAAGVV FLVLVDANRR MREAGEQGPD LMGLLDLVAL
ATVADVAPLI GVNRALVVQG LKVMARRQRP GLVALSDVGR LDRAPTSYHL GFVLGPRVNA
GGRIGAADLG ARCLSTDDMA EAVKLAAQLD TLNTDRREIE QRVREAALVQ AEARGLEAPL
VWAAEDGWHP GVVGIVASRL KDHTRRPAIV IGFDGDDGKG SGRSMAGVDL GASIQKLAAE
GLIQKGGGHK MAAGLSLSRA QLEPAMERLT ELLAKQGAGT GGPADLRLDG TIMTSAATPE
LIEKIEAAGP YGAGAPAPRF ALPALRIRHT RPVGETHLKL TLGDGGPVTI DAICFDAVRS
GLDELQAHNG RSVHVAGRVE LNHWQGRTRV QLRLDDAAWA DE
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