| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1486 |
|---|
| Symbol | |
|---|
| ID | 3933933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1456460 |
|---|
| End bp | 1457149 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637903836 |
|---|
| Product | Asp/Glu racemase |
|---|
| Protein accession | YP_509428 |
|---|
| Protein GI | 89053977 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4126] Hydantoin racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.293318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCAGG CACAAAATCT TTATGTGATT AACCCTAATT CCTCGGACGC GGTGACCCGT
GAAATAGGGG AGGCCATCAC ACCTTTGGAC GGAATGGGAC ATCGCATCAT TTGCGTGACC
AATCGAAGCG GTCCCCCCGG GATCGAAAGC CAAGCACAAG CGGATTTGAC CATTCCACAA
ACGCTGGATC TGGCGGCGGA GGTCGATAAA GATGCTGCCG GGTTTGTGAT TGCCTGTTTC
GGCGATCCCG GTCTCCATGC CTTGCGGGAT CGGACCGCCA AGCCGGTTCT TGGCATCCAG
GAAAGTGCCA TCACGACCGC GCTCACCTTG GGGCAACGCT TTGGCATCAT TGCGATTTTA
CCAAACTCGA TCCCACGCCA CTTGCGCAGC ATAGGCGCGA TGGGACTGCA AAGCCGTCTT
GCCGGGGACC GCGCGCTGAA CCTCGGCGTC ACTGATCTGG CGGACGCCGA CCAAACCCTG
AGCCGGATGA TGCAAGTCGG GGAAACGCTC ATTCACCAAG ACGGGGCGGA CGTACTGATC
ATGGGGTGCG CAGGGATGGC CCGGTTCCGG AAGCCTCTGG AACGGGATCT TGGCGTGCCT
GTTGTCGAGC CGTGTCAAGC CGCTGTTGCC ATCGCCCTCA CCCGTATTCG CTTGAAACAA
AGTCATAAAA CGGAACCCTC CCATGATTGA
|
|---|
| Protein sequence | MDQAQNLYVI NPNSSDAVTR EIGEAITPLD GMGHRIICVT NRSGPPGIES QAQADLTIPQ
TLDLAAEVDK DAAGFVIACF GDPGLHALRD RTAKPVLGIQ ESAITTALTL GQRFGIIAIL
PNSIPRHLRS IGAMGLQSRL AGDRALNLGV TDLADADQTL SRMMQVGETL IHQDGADVLI
MGCAGMARFR KPLERDLGVP VVEPCQAAVA IALTRIRLKQ SHKTEPSHD
|
|---|
| |