| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1336 |
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| Symbol | |
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| ID | 3933783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1302260 |
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| End bp | 1303516 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903686 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_509278 |
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| Protein GI | 89053827 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities
[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTG AACTTACCCC TCCACCCAAA AAGAACCCGC AGAAACGCTC CACCAGTGCG
ACCCGTCCGC CAGAGGCGCG GTCCCGTGCG GCGCTTGGCC TGAGCGCCGC CGCTGCTGAG
GGACGCTTTG CGCTTCAGGT CTGTGCGGAA TGTCAGGCCG TGCAATACCC GCCGCGCGAT
GCCTGCGCGG CGTGCATCGG CACCGATTTG GTCTGGCAAG ATATCTCCCC AGATGGCCAC
CTGTTGGCCG AGACGACAAT CCAGACCTCC ACCAAGCTGT TTTTCCGCGA GCGGGCTCCC
TGGCGAATGG GATCGGTCAA ACTCACGGCG GGGCCCGTTG TTCTGTGTCA CGTTCACGGC
GATTGCACCC GTGGCGGTCC AGTGAAGATA TTGAACCGTT TGGATAAATC AGGCCAAGCC
GTGCTAATCG CAATTCCCCC CGAGAGGACC GAGCATATGG ATGATGACCC CCAACTCCGC
GCGATGTCCG CCAACCCCAA GCACCGTCGC ATCCTGATCA CCGACGCCTG GAACCCAAAC
ACGCCCGCCT TGGCGAAGGC TCTGTTGGAG GCGGGGGCCG CGACGATCTT TGTGGGTGAA
GCAGAAAGCT GGCGGCCCCA TCCCAACCGC GACACGCTGG CGGGGATGGA GAATGTGGAC
ATCCTGCCGC TGGACGTGAC CGACACGGCT TCGGTCCAGA CACTTGCCGG AGAGATTGGC
GGCAAGACCG ACATCCTTAT AAACAACGCC CGCTTCATGC GCCCGGGCGG CGTCCTGGCG
CGCGGGGACA CAGGGTTTGC CCGTGATGAG ATGGAGGTGA ATTACCTCGG GCTCATGCGG
CTTGCGCAGG CCTTTGGTCC CGGCATGTGC GCGCGAATGG CAGATGGGGT GAACTCCGCC
GCGGCCTGGG TCAACATTCT GTCCGCCCAC GCGTTGTCCA ATGCGCCGGA TTATGGGTGT
TTCTCGGCCT CCAACGCCGC CGCCTACTCC CTCAGCCAAT CGTTGCGTGG AGAGTTCCGC
AGCGCCGGGC TGCGGGTCAT GAACGTCTTT GTGGGACCGA CGGACGATGA TTGGTACGCC
CCTTTGCCAC CGCCCAAAGT GCTGCCCACA GGCCTGGCAC GATCTGTCGT GGATGGTCTT
CGCGACGGGC TGGAGGACGT CTGGTGCGGT GACATCGCCA AAGACATGCG CGACCGCTGG
CGGCGTGATG CAAAGGTGCT GGAGCGGGAG ATGACATTCG GGAGTGAAGG CGCATGA
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| Protein sequence | MTIELTPPPK KNPQKRSTSA TRPPEARSRA ALGLSAAAAE GRFALQVCAE CQAVQYPPRD
ACAACIGTDL VWQDISPDGH LLAETTIQTS TKLFFRERAP WRMGSVKLTA GPVVLCHVHG
DCTRGGPVKI LNRLDKSGQA VLIAIPPERT EHMDDDPQLR AMSANPKHRR ILITDAWNPN
TPALAKALLE AGAATIFVGE AESWRPHPNR DTLAGMENVD ILPLDVTDTA SVQTLAGEIG
GKTDILINNA RFMRPGGVLA RGDTGFARDE MEVNYLGLMR LAQAFGPGMC ARMADGVNSA
AAWVNILSAH ALSNAPDYGC FSASNAAAYS LSQSLRGEFR SAGLRVMNVF VGPTDDDWYA
PLPPPKVLPT GLARSVVDGL RDGLEDVWCG DIAKDMRDRW RRDAKVLERE MTFGSEGA
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