| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1277 |
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| Symbol | |
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| ID | 3933723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1237590 |
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| End bp | 1238216 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637903626 |
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| Product | thymidylate kinase |
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| Protein accession | YP_509219 |
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| Protein GI | 89053768 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.431831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCCCC TATTCATCAG CCTTGAGGGC ATCGACGGCT CTGGCAAATC CACCCAGACC
GCGCGCCTGG TCGATTGGCT CCGCGTCCGG GGCCGCGATC CGCTACAGAC ACGGGAACCC
GGCGGATCTG AGGGCGCTGA GGAGATCCGC CGCCTGCTCG TGGAAGGTGA CCCGGACCGG
TGGAGCGCCG AGACGGAGAT CTTGCTGTTC ACCGCCGCCC GTCGCGATCA TCTGGAGCGT
ACCATCCGCC CGGCCCTTGC ATCCGGGCGT GACGTGGTGA CCGACCGCTT CGCCGACAGC
ACCCGCGTGT ATCAGGGGGC CACGCGCGGC GCTTTGCGGG GTCTGGTCGA CCGGATTCAC
GCCGAGGCGA TTGAGGCGGA GCCGGACCTG ACCCTGATCC TCGACATGGA CCCGGAACTG
GCCCTGTCGC GCGGTCTGGC CCGCGACAGC GGAGAGGACA GGTTTGAGGA TTTTGGTCTG
CCGTTCCAGC AAAAACTCCG CGCCGGGTTT CAGGCCCTGG CCCGGGAGTA CCCCGACCGT
TGCCATATCG TGGATGCCTC CGCGGACCCC GACGCAATCG CCCACACCAT CCAGACCATC
GTCGGCCAGC GCCTAGCGGA GGCCTGA
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| Protein sequence | MPPLFISLEG IDGSGKSTQT ARLVDWLRVR GRDPLQTREP GGSEGAEEIR RLLVEGDPDR
WSAETEILLF TAARRDHLER TIRPALASGR DVVTDRFADS TRVYQGATRG ALRGLVDRIH
AEAIEAEPDL TLILDMDPEL ALSRGLARDS GEDRFEDFGL PFQQKLRAGF QALAREYPDR
CHIVDASADP DAIAHTIQTI VGQRLAEA
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