Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1033 |
Symbol | |
ID | 3933477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 984955 |
End bp | 987153 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637903381 |
Product | primosome assembly protein PriA |
Protein accession | YP_508975 |
Protein GI | 89053524 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCCCA TGATTGAGCA TTTTGATGAA GGCGATTTGG TTGGGGTTCT GACGGCAGAG CCCCTGGACC GCGTGCTTGA TTACAAAGCG CCCGCAGGGG GGTGCTGGTT AGGCGCGTTT GTGGAAGTGC CGCTGGGTCC GCGCAAAGTT CTGGGCGTGG TCTGGGGGCC GGGGCGGGGC GATTGGGACA TTGCCAAGGT TCGGTCTGTC AACCGGGTGC TGGACGTGGC CCCGATGCGG GCCGAGATGC GGAAGTTTCT GGAAAAAGCG GGGGCTTACA CGCTGACGCC CATGTCGCTG ATGCTGCGTC TGGCCACGCG GGTGCCGGGC CTGAGCGATC CGCCGTCGAT GCGCAAGGTC TACCGTCTGG GGCAGGGCAC GCCGGACCGG GTGACGCCCG CGCGCACCCG GGTGATCGAG GCGTTGGTGG AATATGGTGG CCTCGCCTTC ACGTTGAAGG AGTTGAGCGA ACTGGCCGGC GTCACATCGA CGGTCGTGAA GGGTCTTGCC AAGCAGGGCG TGGTGGAAGA GGCGGACACG CCCCGCGATG CCCCCTACCT GACGCTCGAC CCCGGCCTGC CCGGCAAGGA ATTGACCGAG GATCAGGAGA TTGCCGCCGA TCGTTTGCAG GAGGGATCGC GCGCCCGGCG CTATGGGGCG GTTCTGCTGA AAGGTGTGAC CGGGTCCGGC AAGACGGAAG TGTATCTGGA GGCGGTCGCG GAATGCCTGC GTCAGGGGCG TCAGGCGCTT GTACTGTTGC CGGAAATCGC GCTGACCTCT GAATTCCTGA CCCGCGTGAA GGCACGCTTC GGGGCCGATC CGGCGGAGTG GCATTCCGGC GTCACCATGA CCGAACGCCG CCGCTGCTGG CGCATGGTCG GGCAGGGGGA GGCACAGTTG GTCGTCGGCG CGCGATCCGC GCTGTTTCTG CCCTACCGGG ACCTTGGGTT GATCGTCGTG GATGAGGAAC ACGACACTTC CTACAAGCAG GACGAAGGGG CCAGCTACAA CGCTCGCGAT ATGGCCGTTC TGCGCGCGTC CCTGAACGAG GCGCAGGTGG TTTTGGCGTC TGCCACGCCG TCGTTGGAGA CGTGGTCCAA CGCGCAGGCG GGCAAATACA CGCGCCTTGA TCTGGTGTCC CGGTTCGGGC CCCAGGATCT GCCGGATATG GCATCCATCG ACATGCGGTT GGAAGATCTG CCGGGGGGCT CCTGGCTGTC ACCTTCGCTG ACATCCGCCG TAGGGGCGCG GTTGCAGGCG GGTGAACAGG CATTGTTGTT CCTGAACCGT CGTGGCTACG CGCCCGTTAC CCTGTGTCGC GCCTGCGGAG AGATGGTGGG CTGCGACCAT TGTGACGCGC GCATGGTGGA ACATCGGTTC CAGAAACGCC TGATCTGCCA CCAATGCGGC GAGACCAAAC CCCTGCCGGA GGTCTGCCCC TCCTGCGGGG CGGAGGGCAA GATGGCCGCG GTCGGCCCGG GTGTGGAGCG GATCGCGGAA GAAGCCGCCG CCGCCTTTCC CGATGCGAAA TTGGCGATCC TGTCGTCCGA CCTGTTCGGC TCGGCCCGGG CGTTGAAAGC GCAGATTGAG GAACTGGCGA ACGGCGATAC CGACCTGATC ATCGGCACGC AATTGGTGGC CAAAGGGCAC AACTTCCCGC GCCTGACGCT GGTGGGTGTC GTGGATGCGG ATTTGGGCCT GCAAGGATCA GATTTGCGCG CGGCAGAGCG GACGTTCCAG CTGATGCGGC AGGTGGCGGG GCGGGCCGGT CGTGCCGACA AGCCGGGCCA AGCGCTGTTG CAGACGTTCC AGCCCGAACA TCCGGTGATC CGCGCAATCC TGTCGGGCGA TGAAGAGGGG TTCTGGCGTA CGGAAGCAGC GGAGCGGGAG GCGGCTGGCA TGCCGCCCTA TGGTCGTCTC GCGGGGATAA TTATCTCCAG CACGGAAGCC GCCGCTGCCT TCGACCTCGG CACGCATCTG GCCCGCAACG ATGGCCCGAT CCGTGAGGCG GGCGGTATCG TCTATGGCCC GGCCCCAGCC CCCATCGCCC GTGTGCGCGG CAGGCACCGG GTGCGACTTC TGGTCAAGGC CCCAAAGGGT GTCGCGCTGC AACCGGCCCT AAGCCGTTGG ACCCACGGGC TAAAACTGCC CGGCCATCTG CGACTTGCCA TAGATATCGA CCCGCAGAAC TTCTTCTGA
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Protein sequence | MDPMIEHFDE GDLVGVLTAE PLDRVLDYKA PAGGCWLGAF VEVPLGPRKV LGVVWGPGRG DWDIAKVRSV NRVLDVAPMR AEMRKFLEKA GAYTLTPMSL MLRLATRVPG LSDPPSMRKV YRLGQGTPDR VTPARTRVIE ALVEYGGLAF TLKELSELAG VTSTVVKGLA KQGVVEEADT PRDAPYLTLD PGLPGKELTE DQEIAADRLQ EGSRARRYGA VLLKGVTGSG KTEVYLEAVA ECLRQGRQAL VLLPEIALTS EFLTRVKARF GADPAEWHSG VTMTERRRCW RMVGQGEAQL VVGARSALFL PYRDLGLIVV DEEHDTSYKQ DEGASYNARD MAVLRASLNE AQVVLASATP SLETWSNAQA GKYTRLDLVS RFGPQDLPDM ASIDMRLEDL PGGSWLSPSL TSAVGARLQA GEQALLFLNR RGYAPVTLCR ACGEMVGCDH CDARMVEHRF QKRLICHQCG ETKPLPEVCP SCGAEGKMAA VGPGVERIAE EAAAAFPDAK LAILSSDLFG SARALKAQIE ELANGDTDLI IGTQLVAKGH NFPRLTLVGV VDADLGLQGS DLRAAERTFQ LMRQVAGRAG RADKPGQALL QTFQPEHPVI RAILSGDEEG FWRTEAAERE AAGMPPYGRL AGIIISSTEA AAAFDLGTHL ARNDGPIREA GGIVYGPAPA PIARVRGRHR VRLLVKAPKG VALQPALSRW THGLKLPGHL RLAIDIDPQN FF
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