| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0582 |
|---|
| Symbol | rpsJ |
|---|
| ID | 3933024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 570883 |
|---|
| End bp | 571194 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637902928 |
|---|
| Product | 30S ribosomal protein S10 |
|---|
| Protein accession | YP_508524 |
|---|
| Protein GI | 89053073 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0051] Ribosomal protein S10 |
|---|
| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTCA GCCAGAACAT CCGCATTCGC CTGAAGGCGT TTGACTACCG GGTTCTCGAT
GCGTCCACGC AGGAAATCGT GAACACCGCA AAGCGCACAG GCGCACAGGT TCGCGGGCCC
ATCCCGCTTC CAAACAAGAT CGAAAAGTTC ACGGTTCTCC GTGGCCCGCA CGTGGACAAG
AAGTCCCGCG ATCAGTGGGA AATCCGCACG CATAAGCGTT TGCTCGATAT TGTCGATCCG
ACCCCCCAGA CCGTGGACGC GCTGATGAAG CTCGACCTCG CCGCTGGCGT GGATGTCGAG
ATCAAGGTTT AA
|
|---|
| Protein sequence | MAVSQNIRIR LKAFDYRVLD ASTQEIVNTA KRTGAQVRGP IPLPNKIEKF TVLRGPHVDK
KSRDQWEIRT HKRLLDIVDP TPQTVDALMK LDLAAGVDVE IKV
|
|---|
| |