Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0054 |
Symbol | |
ID | 3932490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 48864 |
End bp | 49769 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637902395 |
Product | ornithine cyclodeaminase |
Protein accession | YP_507996 |
Protein GI | 89052545 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATCA TCGGACCTGA GGCAGAAGAG CATCTGGATT GGATCGCGCT GTGCGCCGCC ATCGAGGCGG GTCACAAGCT GCCGCGCGCT GACATAGACG ATACGTTTCT TTATCGGGGC AATGATACGC TGCTGAGCCG TGCTGCCTGG ATCGACGGGC TGGGGCAGCT GGTGAAGACC GCCACGATCT TTCCCGGCAA CAAGGCCATG CGCAAACCGG CGATCAATGG CGGCGTCTGT CTGTTCTCGG ACACCGATGG AAGTCTTGAG GCGATTATCG ATTTCCACCT GCTGACCAAA TGGAAGACCG CGGGCGACAG TCTTCTGGCG GCGCGCAAAC TGGCGCGGAC CGATGCGACC AATATCCTGC TGGTGGGGTC GGGCAATGTG GCGAAGTCCA TGCGTCAGGC CTATGCCGCA GCCTTTCCGG ATGCGACATT CACGGTGTGG AACAGAACGC TGGCCAATAT TGCCTCCATG CGGGCGGCCT ACCCTGATAT CGCCATTGCC CACGATCTGC GAGAGGCCGT GGCGAACGCG CATATCATCG CGACCACGAC CATGGCGACC ACACCCGTGG TGCGCGGCAA ATGGCTGGAG CCGGGCACCC ATCTGGACCT GATAGGCGCC TACCGACCCG ATATGAGAGA GGTCGACGAC GATGCTCTGC GCCGGTCCCG TGTCTTTGTC GACAGCCGCG CGACCACCGT GGGCCATATT GGAGAGATGA AGATACCGAT CGAGGAGGGT GTGTTCTTCG AATCCGATAT TGTCGGTGAC TTCTACGATA TGGGAACGTT GCAGCGAACC ACCGACACGG AGATCACGTT GTGCAAGAAT GGCGGCGGGG CGCATCTGGA CCTGATGGTG GCGCGCTACA TCCTTGATGC GGTGCGCGGC GGATAG
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Protein sequence | MMIIGPEAEE HLDWIALCAA IEAGHKLPRA DIDDTFLYRG NDTLLSRAAW IDGLGQLVKT ATIFPGNKAM RKPAINGGVC LFSDTDGSLE AIIDFHLLTK WKTAGDSLLA ARKLARTDAT NILLVGSGNV AKSMRQAYAA AFPDATFTVW NRTLANIASM RAAYPDIAIA HDLREAVANA HIIATTTMAT TPVVRGKWLE PGTHLDLIGA YRPDMREVDD DALRRSRVFV DSRATTVGHI GEMKIPIEEG VFFESDIVGD FYDMGTLQRT TDTEITLCKN GGGAHLDLMV ARYILDAVRG G
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