| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0051 |
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| Symbol | |
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| ID | 3932487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 46326 |
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| End bp | 47267 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637902392 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_507993 |
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| Protein GI | 89052542 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTAG AGATCTTCCT GAAGACGCTA CCATTCTTCG CCCTGATCGC CCTGGGCTTT
CAGGCCTGCC GGACGGGTTT CTTCACGTCG GAGGCTGCGG CCTACCTCAC CAAGTTCGTG
TTCTATTTCG CCCTGTCCGC GATGCTGTTT CGCTTTGCCG CGAACCTGTC GCTGACCGAG
ATCTTCGACT GGCAGTTTGT GGGCGCGTAT CTGACGGCCT GTTTTGTCGT GTATTTCCTC
GCCACAGCGG TTGCGATGAT CCGCAAGCGC CCCGTCACCG AAGCCGCGTT CGAGGCGCAA
TGCGCTGTCA TCGGAAACGT CGGATTTCTG GGCGTGCCGA TGCTGGTCGT CCTGTTGGGA
GAGGCTGCGG CAGGCCCGAT CCTGTTGGTT CTTGCGCTGG ACCTGATCGT CTTCTCCAGC
CTGATCGTGA TCATCGTCAC CGGAAGCCGC GATGGGCGGA TGTCCTTGGG CGTCCTGCGT
ACCGTTGGGG TGGGCTTGTT GAAAAACCCC ATGATCGTAT CGATCTCTCT GGGATTGGCG
TGGTCCACCA CGGGCCTTGC TGTGCCGGGA CCCGTCAATG AATTCCTCGC CATTCTGGGC
GCTGCGGCGA CACCCGGAGC GCTTTTTGCC ATCGGGGCCT CCCTCGCTGG AAAGTCGGCG
GAAAGGATGT CCGTGGCGGG TTGGCTGACC TTCTGCAAAC TGATCCTCCA CCCGCTGGCC
GTCGCCATCT GCGCCCTTTG GCTGTTCGAT GTCCCCGATT TTGAGGCCGC CGTGATGATT
GCTGCCGCCT CCCTTCCCGT GGCAGGCAAC GTCTATATCC TGGCGCAACA TTATGGCGTA
GCGCCCCAGC GGGTATCGGC GACGATCCTG ATCTCCACGG CGGTTTCAAT TCTGACGGTC
TCGGCGGTCA TCGCATGGCT GGCACCGCTT TCGGGCATGT AA
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| Protein sequence | MMLEIFLKTL PFFALIALGF QACRTGFFTS EAAAYLTKFV FYFALSAMLF RFAANLSLTE
IFDWQFVGAY LTACFVVYFL ATAVAMIRKR PVTEAAFEAQ CAVIGNVGFL GVPMLVVLLG
EAAAGPILLV LALDLIVFSS LIVIIVTGSR DGRMSLGVLR TVGVGLLKNP MIVSISLGLA
WSTTGLAVPG PVNEFLAILG AAATPGALFA IGASLAGKSA ERMSVAGWLT FCKLILHPLA
VAICALWLFD VPDFEAAVMI AAASLPVAGN VYILAQHYGV APQRVSATIL ISTAVSILTV
SAVIAWLAPL SGM
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