Gene ECH_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0024 
SymbolglyS 
ID3927225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp19647 
End bp21758 
Gene Length2112 bp 
Protein Length703 aa 
Translation table11 
GC content27% 
IMG OID637901149 
Productglycyl-tRNA synthetase, beta subunit 
Protein accessionYP_506857 
Protein GI88657718 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0751] Glycyl-tRNA synthetase, beta subunit 
TIGRFAM ID[TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.700385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTAG AACTATTATT TGAATGCTTA TCAGAAGAAA CACCTCCTGA GATGCAGAGT 
AGTGCATATG CATACATGGA TTCTTATATA AGAAAAGAAC TAAGTCGTTG TAACATCAGT
TTTGAGTCTG TAAAGGTATT TGTAACTTCA AATAGATTAA CCTTGTATGT AAAAAATATA
ATCAATAACT TATCAAATAA TACATTAAAG ATAAAAGGAC CTAAAGTATC AGCAGATAAG
ATTGCAATAG AAGGTTTTTT AAAGAAAGTT AATAAAAATT TCAGTGACCT TATAACATGC
AAAATCGGTA ATGATGATTT TTACTATGCT GAGCTTAATC ATAATGAAGA AACAAATACA
GAACATATAA TCCTATCAAT TATAGAAAAC ATGTTAAACA ACTTTCCATG GGATAAAAAA
ATGAGATGGG GAGGTGGAAA AACATATTGG GTTCGCCCTA TACTAAATAT AATGTGTATA
CTTGATGGAA AAGTACTACC AATAAAGTTT GCAGATATAG AAGCAAATAA CAAATCATGT
GGTAACAGAT TCACAAATAA AGAATTTTTT GAAGTTGCAG ATTTTAATTC TTATAATTCA
AAACTAAAAA AAAATAATGT AATTTTATGC CAAAAAGAAA GGCTCAATTT TATATTACAT
CAAATAAAAA GTATAACAGA AGAAAGTAAT TTAATATGTG AGGATAATCA AAAATTAATT
AATAAATTGA ATGGAACTTT AGAATATCCA ATAGTTATCA TGGGATCAGT GGATGAAAAA
TTCTCTGAGT TACCAAAGGA ATTAATACTA AGTGTGATGC ACAATCATCA AAAATACCTA
GCTGTTTTTA AAGAAGACAA AATTACAAAC TTTATTACGA TATCTACTAT ATCAAATGAT
AATATAATAA AAGGACACAA TAACATATTA AATGCCAGGC TATTAGACGC AAGTTTTTTG
GTAAAAAAAG ACAAAGAATA CAATATTGAT TACTACATAG AAAAACTCAA ACAAATAGTA
TTTCATGCAA AACTTGGATC TGTTTTTGAA AAAGTGAACC GCATAATAGC TTTATCAAAA
TACATTTCCA TATGGATACC TCATTCCTCA TTGATAAAGG TAGAAAGAGC AGCAAAATTA
TCCAAGTTTG ATTTATCAAC ACTAGCTATA AAAGAATTTC CAGAACTACA AGGAATAATG
GGAGGATATT ATGCCTCTTA CTTTAATGAA TCATTAGAAA TTTCAGAATC TATAGTTAAT
CACTACGAGC CAACAAACCC ACAAAAAGAA TGTCCTTCTT CTCCTATATC AATAGCTGTA
TCCATATCTG ATAAAATAGA TAACTTAGTT GGAATGATAG TTGCAGGAGA GCAAGTTACC
AGTTCCCGTG ATCCTTTTTC CATGAGAAGA ATGGCTATAT CAATTATTAG AATAATAATC
GAAAACAATT TAAACATACC AATAAGGCTT TTAATAGAAA AATCTGTATC ACTGTACTCA
TTTGCAATTA CAGAAAGAAC TACTATTAAC AAACTTAAGA ATGTAATATC AAGAACAAAC
AGAAAAAAAG AAATTATTTC ATCTGTAATA GAATTTTTTT CAAATAGATT TAAAATTATC
CTAAAAGAAG ACGGCATAAA GGAAGATATA ATAAATGCCG TATTTGAAAG CAGAAAATTC
AGTAATTTAT TGTTAATAAA AACAGAAGCT AAGTTTCTTA ACAATTATAT TTTTACCAAA
AATGGGGTTG AAATAATAAA GGCATATAAA AGACTTAGTA ATATAATTAC AAAGGGAGAA
AACGTAAACA ATACAGCAAA GTACAAGTGT AATAAAAAAT TATTCACAAT AAAAGAAGAA
ACTGATCTAT ATAAAGAAAT AACTTACCAA AAAAATAATA TAAAAAGATT GATAAAGGAC
AACAAGTTTG AGGAATCGTT AAATAATCTT TACAAATTGA GTTGTTGCGT AAACAGTTTT
ATGGACAACG TAAAAGTAAA TGATCAAACA AATAAAGAAT TACATAAAAA CAGGCTTTCT
ATTGTTAAAA ATGCATTTTA TATTTTTGAC TTAGTTACAG ATTTTAGTAA GATTAAAAAT
ACACATAGGT AA
 
Protein sequence
MPLELLFECL SEETPPEMQS SAYAYMDSYI RKELSRCNIS FESVKVFVTS NRLTLYVKNI 
INNLSNNTLK IKGPKVSADK IAIEGFLKKV NKNFSDLITC KIGNDDFYYA ELNHNEETNT
EHIILSIIEN MLNNFPWDKK MRWGGGKTYW VRPILNIMCI LDGKVLPIKF ADIEANNKSC
GNRFTNKEFF EVADFNSYNS KLKKNNVILC QKERLNFILH QIKSITEESN LICEDNQKLI
NKLNGTLEYP IVIMGSVDEK FSELPKELIL SVMHNHQKYL AVFKEDKITN FITISTISND
NIIKGHNNIL NARLLDASFL VKKDKEYNID YYIEKLKQIV FHAKLGSVFE KVNRIIALSK
YISIWIPHSS LIKVERAAKL SKFDLSTLAI KEFPELQGIM GGYYASYFNE SLEISESIVN
HYEPTNPQKE CPSSPISIAV SISDKIDNLV GMIVAGEQVT SSRDPFSMRR MAISIIRIII
ENNLNIPIRL LIEKSVSLYS FAITERTTIN KLKNVISRTN RKKEIISSVI EFFSNRFKII
LKEDGIKEDI INAVFESRKF SNLLLIKTEA KFLNNYIFTK NGVEIIKAYK RLSNIITKGE
NVNNTAKYKC NKKLFTIKEE TDLYKEITYQ KNNIKRLIKD NKFEESLNNL YKLSCCVNSF
MDNVKVNDQT NKELHKNRLS IVKNAFYIFD LVTDFSKIKN THR