| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0402 |
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| Symbol | |
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| ID | 3932220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 326227 |
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| End bp | 327927 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637900558 |
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| Product | inner membrane protein, 60 kDa |
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| Protein accession | YP_506289 |
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| Protein GI | 88608477 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAGA CATACAACGT TTTCATAGCA ACTCTGTTGT CGTTTCTCGT GATCATCGGG
TGGAACCTCG TGTTCTATAA TCCCACACAA AGAGAGAGCT TTCATGAAGT CCAAAAAAAA
GAAAGCGTCA AAGTATATGA GTCTTTGGAA AGCACCCTGA GTACAGAACG AATCAAAATT
AGCAGCAGCA AGCTCGAGGG AAGTATCCAG TTAACTGGCC TTGCTCTCGA TGATCTGATC
CTAAAAGATT ACAAATCTGA TGACCTAAAA GATCAGTATC GCCTTCTTTA TCCGAACAAG
ACAAAAGGTG CATATTTCAT TAATCCAGGC TGGACAATAC CCGGTGATCC TGGCCTTAGG
ACTCCCTCTT CCAAAACCAA ATGGCAGGCT GATTCTGAAC TTTTAACTCC TGGCAGTCCA
GTAACTTTTT CTTGGGACAA CGGGTTTGGT CTGCTTTTTA AAGTGGTTGT GAGTATCGAT
GATAATTACA TGTTTACCTT CAAGCAAATC GTTGAGAACA AGTCGCAAAA CGATCTAAGT
GTCGGCTCAC ACTTTACAAT CACCAAGAGT CTCCCTGAAA CAAATAAAAG CATGCTTATA
ATGCATGAGG GGCCCGTAGG AGTAGTAAAA GATCAGCTAA TGGAGCTCAA GTACTCTAAA
ATAGCAAAAA AGAACAAGAG TATAGCATTT GACGAAGACA CCCAGAATCA ACGGGGATGG
TTTGGCTTTT CAGACAAGTA TTGGTTTGTC TCGCAGATTT TCGAGAACTC ATCAGACGGG
AAGGTGTATA TCAGTCACAT TGATGATAAA AGCGATGACA TCTTCCGCAT TACAAATTTT
AACGCACAGA AAATAGTCCG TGGTGGTGGC CTTATTGTAA AGGAAACTAT GCTCTTCGCA
GGGCCCAAGA AGCTATCTCT CTTAGAAGAA TACGCACAGA ACATGAGAAT CTATCTCTTT
GATAGAGCCG TAGATTTTGG TGTTTTGTAT TTTATAACGA AACCCATTTC AAAATTGTTA
CAGGTTTTCC ATCACCTCGT TGGGAATTTC GGTGTTGCAA TTATACTGTT GACTTTCTTC
ATCAGGGTAC TAATGTTGCC ACTATCAATT AAATCTGGTA TCTCGATGTT CAAGATCAAG
GAGTTGCAAC CTGAAATCCT TAAGATCAAA TCGATGTACC AAAATGATAA GGATGCGCTA
AACAGAGCGA GTGTCGAGTT GTTTAGAAAG CATAGAGTCA CACCGATGTC AGGCTGTTTG
CCAACTCTGT TGCAAGTCCC GGTGTTTTTT GCACTCTACA AGGTAATCTT TATAACTGTA
GAAATGCGGC AGGCGCCGTT TTTTCTATGG ATTTCTGATC TCTCGCTGCC AGATCCAACA
AATTTGTTTA CTCTATTCGG TTTAATTGAT TGGAACTGTC CCGATTTTCT TTCAATAGGA
ATACTACCTA TAATACTCGG ATTAACCATG GTCATTCAAC AAAAGCTTAG CCCATCACAC
TATGACGACG GCACACAGGC TTTTATGATT AAAGCTATGC CGTATGTTTT CATGATATTG
TTCGCGAGCT TTCCTTCAGG TTTAGTTCTT TATTGGGTAT TTAATAACGT TCTCTCACTA
CTGCAACAGT TCGTGATAGG TAAATACCTA TTTACTAAAA AGTTTAAAGC TATGACAAAA
ACTCAAGAAA GCCTCCCTTG A
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| Protein sequence | MQQTYNVFIA TLLSFLVIIG WNLVFYNPTQ RESFHEVQKK ESVKVYESLE STLSTERIKI
SSSKLEGSIQ LTGLALDDLI LKDYKSDDLK DQYRLLYPNK TKGAYFINPG WTIPGDPGLR
TPSSKTKWQA DSELLTPGSP VTFSWDNGFG LLFKVVVSID DNYMFTFKQI VENKSQNDLS
VGSHFTITKS LPETNKSMLI MHEGPVGVVK DQLMELKYSK IAKKNKSIAF DEDTQNQRGW
FGFSDKYWFV SQIFENSSDG KVYISHIDDK SDDIFRITNF NAQKIVRGGG LIVKETMLFA
GPKKLSLLEE YAQNMRIYLF DRAVDFGVLY FITKPISKLL QVFHHLVGNF GVAIILLTFF
IRVLMLPLSI KSGISMFKIK ELQPEILKIK SMYQNDKDAL NRASVELFRK HRVTPMSGCL
PTLLQVPVFF ALYKVIFITV EMRQAPFFLW ISDLSLPDPT NLFTLFGLID WNCPDFLSIG
ILPIILGLTM VIQQKLSPSH YDDGTQAFMI KAMPYVFMIL FASFPSGLVL YWVFNNVLSL
LQQFVIGKYL FTKKFKAMTK TQESLP
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