| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0179 |
|---|
| Symbol | pyrD |
|---|
| ID | 3932024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | + |
|---|
| Start bp | 148110 |
|---|
| End bp | 149156 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637900335 |
|---|
| Product | dihydroorotate dehydrogenase |
|---|
| Protein accession | YP_506074 |
|---|
| Protein GI | 88608290 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAGA AGCTTTTAGT GGCACTTCTG CAGCGTTTGA ACCCGTCGTT TGCGCATGAT
GTGACTCGCG TGGTACTCAA GCATTTTCCG GGATTTGTAA GCCAAAATTC TTTTGAGGAC
CCGATTCTGG AAAGTAGGGT GTGTGGTTTG CATTTTAAAA ACCCAATTGG TATTGCAGCT
GGATTTGATA AGAATGCTGA ATGTGTTACT GCGCTCAGGA GAGTAGGATT TGGCTTCATT
GAGCTTGGAA CCGTCACACT TAAACCGCAA AAGGGGAACC CCAGTCCTCG ATTGTTTAGA
TTGCCGCAGG ACGGTGCCAT CATTAATCGA CTTGGATTTA ATAATAAAGG GATAGCCTAT
TTCCTCAAAT CGCTTAAGAA AGCTATGACA CACATGGATT TGCCACCTTT AGGAGTTAAT
ATCGGAAAAA ATGCTGTTTC AAGTAATGCC GTTTCTGATT ATGCACGCTT GGCTGCCTAT
GTCTCCTCGG TTGCCGACTA TATCACGCTA AATATCTCTT CTCCGAATAC TGTTAGTCTC
AGGGATATGC AAAAAGTGGA GATCCTTGAG GAACTTCTTA TTGCTGTAAA GGCAGCAGTT
GGAAGTAATG TACGGATTTT TATCAAGGTG GCTCCTGATC TTGCTGAGGG AGCAGAGGTC
GGTATTATTT CGCTTGCTTT GAAGCACAAA GTAGCCGGGA TCATAGTAAG TAATACTACT
ATTGGATGTA GGGAAAGCCT TCATAGTAAG CATAAAGTCG AATACGGTGG TTTAAGTGGT
ACACCACTGT TTAAACTTTC TACAGGTTTG TTGAGAAAAA TGTATAGGTG CACAAACGGG
GAATTGGTTT TCATAGGTTG TGGTGGCATT TCAGATGCAG AAACGGCTTA TGCGAAAATT
AGAAATGGTG CTGCTTTAAT TCAAGCTTAT ACGAGTTTCA CCTATCATGG TTTTGGCCTT
CTGAACCAGA TCAAAAAAGA TTTGGTTCAG AGACTTAAGG CTGATGGTTT TTCTTCTGTA
AGTGAGGCTG TAGGTGTGGA TGCGTAA
|
|---|
| Protein sequence | MHEKLLVALL QRLNPSFAHD VTRVVLKHFP GFVSQNSFED PILESRVCGL HFKNPIGIAA
GFDKNAECVT ALRRVGFGFI ELGTVTLKPQ KGNPSPRLFR LPQDGAIINR LGFNNKGIAY
FLKSLKKAMT HMDLPPLGVN IGKNAVSSNA VSDYARLAAY VSSVADYITL NISSPNTVSL
RDMQKVEILE ELLIAVKAAV GSNVRIFIKV APDLAEGAEV GIISLALKHK VAGIIVSNTT
IGCRESLHSK HKVEYGGLSG TPLFKLSTGL LRKMYRCTNG ELVFIGCGGI SDAETAYAKI
RNGAALIQAY TSFTYHGFGL LNQIKKDLVQ RLKADGFSSV SEAVGVDA
|
|---|
| |