Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_3199 |
Symbol | |
ID | 3924833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 3490732 |
End bp | 3492429 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637898805 |
Product | TPR repeat-containing protein |
Protein accession | YP_504600 |
Protein GI | 88604422 |
COG category | [N] Cell motility [R] General function prediction only [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.714786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCTC ATCATGTCCT ATTTATCTTT CTTATCCTGC TTCTCCTGTT CTGCGGTTGT ATTACAGATA CAAATGTAAC CGCTCCAGAT ACAGAATCAG GCACACCGGA TACCCTTGCA ACTCTTCAGA GTTTACTGGA ATCAGATCCT GAAAACCCTG ATCTCTGGTA TGCAATGGCT GAGATACTAA AAGAACAAGG TGATAACGAA GGGGCAATAC ATGCAATCAC CAGAGCCGCT GAATTCAGCC CTGGAAACAG CACAATCCTG CTTGCAAAAG CGCACCTCCA CATAACGAAA GGAGAGAGAG ATCAGGCAAA CCGTGCCATC CTGAAAGTCC TTGATATCCT TCCCGGGAAC AAAACCGCTT TAGACCTTTT ATCATCCTTG CGAATGAACA CAACAACTCC CCTGAACTAT ATCCTGGTCG AACATGATCT CCTGATCGAA CCAAATAATA CTTGGTCAGC CTTTAATAAA GGGCGCCTGC TTTTTGAAGA GGGGAAACAC CGTGAGGCAC TTGCCTGGTT CATCAAAGCT ACCACCTATG ATCAGAAGAA CGCACCTGCC TGGTACTTCA CCGGAACAAC ATATACCGAA CTGGGAAATT ATGCGCAGGC AATCGATGCT TTGCAATCGG CACTGACACT TGATCCCTCA AATGCCGGTG CCTATTATGA GATGGGCAGG GCGTATGAAA AACTGGGAAA CCGCACCGCA GCCAGGAATT ATTATGAAAC TGCGATAAAA TTAAATCCGG ATAATGTATG GACACGATTT GTTTATGGAA AAAACCTGGC CATCTCTGGT GACTACGAAT CTGCAATAAA GGAGCTGAAA ACAAGTCTTA AAGGATCATC ATGTCAGGCA TCAGCCTGGT ATGAACTCGC CAATGCATAT TACCAGACCG GACAGTATGA CCAGGCTCTT GAGGCTATCA ACTCTGCACT CACCATTGAC CCATATACAA AAGAATACCG GGCTTTGTAC CTCTCTATAC GGGCAGCACA GGATCCCGCC TCCTGGTCAC TGCAAAATGT AACAAAAAGA GCTGTTGATG CACCTGAAAA TGCATCGGTT TGGTTCTATC AGGGCGCGAT TGCATATCAT GACGGGAGGT ATGCAGATGC ACTCACGTAC CTCACCTCTG CGGTCAGTCT GGATCCGATG AATCCGGAGG CATGGTACTA CCGGGGAGTG ACCCAGTATG AACTTGGCAG GTATCAGGAT GCATTATGCA GCTTTGATAA AACGATACTC CTGGATCCCG GAAATGCATG GGCATATTAC TACCGGGGTG ATATCCTGCA GAAAGGGGGA CAGTGTGAAT ACGCTATTGC CTATCTGAAT AAGGGAATAC AACTGGATCC TACTATTCCC TGGACATATT ATGTGAAAGG GAACTGTTAC CTGAACCAGA GCAGATATCA ACTTGCTGCA GATGAATTTG ACAGATCAAT TGACCAGTTC CCCTGTAACC GCTGGGCATG GTTCTTTGGA GGGCAGAGTT ATTACGGACT CGGAAAATTT TCCATCGCCT ATGATTACTT TACAAAAGCC CTGTCATTTG ATCCTGAAAA TGAGGAGTTC AGAAGGTGGA AGGCACGGGC AGCTGCAGAG TCATCGTATC CGGATGAGGC AATCTATCAC TACAACCAGA CCCTCCCGTT CTCAACCGGT GCCTGTGGCA TCATGTAA
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Protein sequence | MQAHHVLFIF LILLLLFCGC ITDTNVTAPD TESGTPDTLA TLQSLLESDP ENPDLWYAMA EILKEQGDNE GAIHAITRAA EFSPGNSTIL LAKAHLHITK GERDQANRAI LKVLDILPGN KTALDLLSSL RMNTTTPLNY ILVEHDLLIE PNNTWSAFNK GRLLFEEGKH REALAWFIKA TTYDQKNAPA WYFTGTTYTE LGNYAQAIDA LQSALTLDPS NAGAYYEMGR AYEKLGNRTA ARNYYETAIK LNPDNVWTRF VYGKNLAISG DYESAIKELK TSLKGSSCQA SAWYELANAY YQTGQYDQAL EAINSALTID PYTKEYRALY LSIRAAQDPA SWSLQNVTKR AVDAPENASV WFYQGAIAYH DGRYADALTY LTSAVSLDPM NPEAWYYRGV TQYELGRYQD ALCSFDKTIL LDPGNAWAYY YRGDILQKGG QCEYAIAYLN KGIQLDPTIP WTYYVKGNCY LNQSRYQLAA DEFDRSIDQF PCNRWAWFFG GQSYYGLGKF SIAYDYFTKA LSFDPENEEF RRWKARAAAE SSYPDEAIYH YNQTLPFSTG ACGIM
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