Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1253 |
Symbol | |
ID | 3924195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 1425426 |
End bp | 1427123 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637896894 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_502716 |
Protein GI | 88602538 |
COG category | [F] Nucleotide transport and metabolism [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase [TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0348661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.248456 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACCGG TAATTACATA TTCGCGGAAT GTTTTTGTGC CACTCACCTT TGTCTGCAGA AATATCTGCG GGTACTGTAT ATTCCGTCGC CCGCCTGGAG AAGGTTGTGT TCTTTCACCT GACGAGGTCA TACGGGTACT GAGGCGCGGG GCAGAGGCCG GATGCACAGA GGCCCTCTTT ACCTTTGGTG AGCATCCTGA AGAGGTGGCA GGTTTTATGC CTTTCCTTGA GCAGTATGGT TTCGGTTCGA TCCTGGAATA CTGTCATGCA ATGGCAGAAG AGGCGCTCCG TCTCGGTCTT CTTCCGCATA CCAATGCCGG GATCATGACT GCTGACGAGA TGAGCTACCT TGCTGATGTC AATGCCAGTA TGGGACTTAT GCTTGAGACC ACCGCCGACA TCCCAGCGCA CCGGAACTGC CCGGGGAAAG AACCTGCACG GCGTATCGCC ATGATTGAGG ATGCCGGCAG ACTTAAAATA CCGTTCACTA CCGGCATTTT ACTTGGAATT GGTGAAACCC GGTCAGACCG GCGGGAATCA TTAGAGGTAA TCGCCGGTCT TCACCGAAAA TATGGCCATA TCCAGGAGAT CATCATTCAG AACTTCTGCC CAAAGCCAGG TACTGATATG AGTGCATTTC CTGGAGCAAC CCTTCGTGAT ATGCAGGAGA CGGTCCGGAT GGCGAAAGAG ATCCTTCCTT CTGATATTGC CATTCAAATC CCTCCAAATC TTGCCGACGC TGCACAAATC CTCCCTTGTG GGGTAACAGA CCTTGGTGGC ATCTCCCCGG TGACGATTGA CTATGTAAAT CCTGAGCATC CCTGGCCGGC TTTTGATGAA CTTGCGGCCT TAACGAAAGG GTACACGCTT AAAGAACGGC TCTGTATTTA TCCTGAATAT ATACGGAGAG GGTGGTATCA CCCACGGCTC AGGGATTGTA TCATCAGCCT TGAGAACACA ATACATATGA GAGGTACATC CGTGATACCG GCAAAACCCC TGTATGAGGG GAAAGCAAAA TCAGTTTATG CCAGTGAGAA TCCTGATGAA CTGATTGTTG TCTTTCGAAA TGATATGACC GCCTTTAACG GGGTCAAGCA TGACCAGTTT ACTGACAAGG GAAGACTTAA TGCAACGGCG TCGGAATTCT TCATGAAGAT GCTTGAGGCC GAAGGAATTC CAACTCATCA TATCCGGATG TCTGCACCTG ATACTATGAT CGTCCGTCGA CTGGAGATGA TCCCGCTTGA GGTCATTGTC CGGAATGTTG CTGCCGGTTC CATGACCAAG AAATATCCGG TTAAGGAAGG AATGGTGCTG GATCGCCCGG TGGTCACTAT TGATTATAAA GATGATGAGC GCGGCGATCC AATGATCAAT GATGATCTTA TTGAGGTTCT GCACATTCTG ACTGCTGATG AACTCCGAAA GGTTAAGGAG ATGGCCTTAC ATGTAAACAA GGTCCTTACC CGGTTCTTTG ATGAGTGTGG TATCAGACTT GTCGACTTTA AGCTTGAGTT TGGAAAGGCA GACGGCACTA TCTACCTTGG TGATGAGATC AGCATGGATT CCATGCGGCT TTGGGACAAA AAAACCGGAG AGTCATTTGA TAAGGATGTG TACCGGTTTG ACAAGGGCGA TGTCATTGCC GCGTACCGGA ATGTTCTCAA ACGGATAATT CCGGATTCCG GAGTATAA
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Protein sequence | MSPVITYSRN VFVPLTFVCR NICGYCIFRR PPGEGCVLSP DEVIRVLRRG AEAGCTEALF TFGEHPEEVA GFMPFLEQYG FGSILEYCHA MAEEALRLGL LPHTNAGIMT ADEMSYLADV NASMGLMLET TADIPAHRNC PGKEPARRIA MIEDAGRLKI PFTTGILLGI GETRSDRRES LEVIAGLHRK YGHIQEIIIQ NFCPKPGTDM SAFPGATLRD MQETVRMAKE ILPSDIAIQI PPNLADAAQI LPCGVTDLGG ISPVTIDYVN PEHPWPAFDE LAALTKGYTL KERLCIYPEY IRRGWYHPRL RDCIISLENT IHMRGTSVIP AKPLYEGKAK SVYASENPDE LIVVFRNDMT AFNGVKHDQF TDKGRLNATA SEFFMKMLEA EGIPTHHIRM SAPDTMIVRR LEMIPLEVIV RNVAAGSMTK KYPVKEGMVL DRPVVTIDYK DDERGDPMIN DDLIEVLHIL TADELRKVKE MALHVNKVLT RFFDECGIRL VDFKLEFGKA DGTIYLGDEI SMDSMRLWDK KTGESFDKDV YRFDKGDVIA AYRNVLKRII PDSGV
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