Gene Mhun_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1123 
Symbol 
ID3922488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1268407 
End bp1269615 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content50% 
IMG OID637896762 
Productgeranylgeranyl reductase 
Protein accessionYP_502591 
Protein GI88602413 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCG AGTATGATGT TCTCGTAGTG GGAGGAGGTC CTGGCGGAGC ATTTGCTGCA 
AAGACCTTTG CCGAGAAGGG GTATTCTGTC CTGCTCACTG AGAAACGCCC TGCCATTGGT
GCTCCGGTCA GATGTGCCGA AGGAGTCGGA AAAGCCCTGA TGCATGAGTT CTTCAAGCCT
GAAGACCGGT GGGTTGCAGC AGAGATTGAG AAGGCCAATA TCATAGCACC TGACGGGTTT
AAGATGGAAC TTGAACCGGA AAAGGCAGGA GCAGAGGTCG GCTATGTTCT GCACCGCAAG
GTATTTGATC GGGACCTTGT CTGGATGGCA GCCGGAGCAG GAGCAGACAT CCAGGTTAAG
ACCCGTGCAG TTACCCCAAT CATGGAGGAT GGAGCGGTAA AGGGTGCTAT TCTTAATCAG
GGAGGCATTG CTCAAGAAGT AAGGGCAGGA CTTACCATTG CAGCAGACGG TGTTGAGTCA
AAGTTTGCAC GCTGGTGCGG TGTTGACACA ACGGTCCCTC TTCGTGAGAT GGAGACCTGT
GCCCAGTATC TGATGACCGG GATTGACATC GATGCTCATG CAACCGAGTT CTACGTGGGT
AACAACATCG CTCCAGGTGG CTATGTATGG ATATTTCCAA AAGGTGACAA AACCGCTAAC
GTGGGTATTG GTGTCGGTGG AGACCGGTGC AAACCAGGAA ATCGGCCGAT TGACTACCTG
AATCGTTTCG TCGCCAGGAA TTTTCCCAAT GGTAAGACCA TCGAGCTGAT AGCCGGCGGT
GTCTCTATCT GTCAGCCACT CCCATGCACA GTTGCAAACA ACCTCATGAT CGTCGGTGAT
GCAGCCCGTG TGTCTGATCC TCTCACCGGT GGTGGTATCT ATGCCGCTCT CTATACCGGA
AAACTTGCCG GAGATGTTGG ATCCAAGGCT ATTGAAAAAG GCGATACATC TACTCAGGCA
CTCATGCCCT ATGACGAGAC ATGGAGAGCA TCGTATCTTG GAAAGGCGCT TGAGAGAAAT
TACCAGATTA AAGAGGTATT CGTCAAATTG AATGATGATG ACCTGAATGC AATTGTGCAC
TCAGTCTCAA AAATGAACCT TTCAGATTTC AATACCTTAA ATCTTATAAA AAATATCATC
GCAGCAAATC CCAAGCTTGC AATAAAACTT GGGAAAGCAG GTCTGAAGTC ACTTCTTGAC
TCATTCTGA
 
Protein sequence
MKREYDVLVV GGGPGGAFAA KTFAEKGYSV LLTEKRPAIG APVRCAEGVG KALMHEFFKP 
EDRWVAAEIE KANIIAPDGF KMELEPEKAG AEVGYVLHRK VFDRDLVWMA AGAGADIQVK
TRAVTPIMED GAVKGAILNQ GGIAQEVRAG LTIAADGVES KFARWCGVDT TVPLREMETC
AQYLMTGIDI DAHATEFYVG NNIAPGGYVW IFPKGDKTAN VGIGVGGDRC KPGNRPIDYL
NRFVARNFPN GKTIELIAGG VSICQPLPCT VANNLMIVGD AARVSDPLTG GGIYAALYTG
KLAGDVGSKA IEKGDTSTQA LMPYDETWRA SYLGKALERN YQIKEVFVKL NDDDLNAIVH
SVSKMNLSDF NTLNLIKNII AANPKLAIKL GKAGLKSLLD SF