| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0972 |
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| Symbol | |
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| ID | 3923616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 1089617 |
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| End bp | 1091215 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637896609 |
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| Product | chaperonin Cpn60/TCP-1 |
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| Protein accession | YP_502441 |
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| Protein GI | 88602263 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.674517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCTC AACAACCGGT AATCATTCTG AAACAGAATG TCGAGCGTAC ACAGGGATAT
GAAGCCCAGC GCTCCAATAT AGCAGCAGCA AAAGCACTTG CTGAGGCGGT TCGGTCCACC
TTAGGTCCAC GTGGAATGGA TAAGATGCTC ATTGATGGGA CCGGAGATGT CACCATCACC
AATGATGGTA TTACGATTCT TGATGAGATC TCTGTCCAGC ATCCTGGGGC AAAGATGGTC
ATTGAAGTCT CTAGAACCCA GGACGAAGAG GTGGGAGACG GGACGACCAC TGCTGTCATT
CTTGTAGGCT CACTTATGGA ACAGGCAGAG TCCCTGCTTA ACAAGAAGAT CCATCCAACC
GTCATCTGCC GTGGATACCG GATGGGAATG CTGAAGGCTC TTGAAATTCT GCAGTCAATG
GCATCTAAGA CTGACGCATA CAATAAGGAC GTCATGAAGA AGATTGTTCA GACTGCAATT
ACCGGCAAAT CAATTGAGGA CGTCAAGGAT AAAATTAGTG ATATCTCTGT TGAAGCGGTA
ATGAAAGTTG CCACCAAGGA TGGAAACAAG GTAACGGTGA ATGAGGATGA TGTTAAGATC
AAAAAGCACA CCGGCGGAAC CATGGATGAT GCAGAACTTA TCATGGGCTG CGTTATTGAC
AAGACCCGCG TTAACCAGGA GATGCCAAAA CGCGTAATCA ATGCAAAGGT TGCAATTGTT
CAGAAGGAGC TTGAGATCAA AAAGACAGAG GTCAAATCAA AGATCAAGAT CTCAAGCACT
GAGCAGGTCG AAGCATTTGC AGAACAGGAG CGGAGTGCAT TAAAGGAGAT GGCAGATGCT
GTGGCAAAAA CCGGAGCAAA TGTTCTCCTC TGCCAGAAAG GAATTGCAGA TGCTGCCCAG
TTCTACCTTG CAAAAGCAGG AATTCTTGCC ATTGAAGATG TTCCGGAAGC AGATCTGAAA
TTTGCAGCCC GCTCACTTGG CGCAACAATT GTTACAAAAG CTGAAGACCT GAAAAAGAGT
GACCTTGGTG TTGCAGAGAA GGCAGAGCAA CTTGATGACG CAGATATGGT AGTCATAACT
GGTGCAAAGA ACCCAAAGAC TGTGACTATT CTTCTTCGTG GTTCTACCTA TTACCTGGTT
GATGAACTAG AACGTGCTGT TGTCGATGCA ACCCGGGTAG TCATGGATGC AATGGAAGAC
GGACTGTTTG TGCCAGGTGG AGGAGCAGTT GAGAGTGAAC TTACCGTCCG CCTTCGTGAC
TATGCTGTTA ATGTCGGTGG ACGTGAGCAG ATCGCCATCG AAGCATATGC AGATGCATTC
GCTGCTATAC CAATCACCCT TGCGGAAAAT TCCGGTTATA ATCCAATCGA TAAACTGGTA
GAGTTAAAGA AGGCACATGC AGAAGGGAAG AAGAACTTCG GACTGAATGT GTACACTGGT
AAACTGGTGG ATATGCAGAA AGAAGGAGTT ATTGAACCAA TCAGATGCAA GAGGCAGGCA
ATACAGAGCT CAGAAGAAGC TGTAGAGATG CTGCTTCGGG TTGATGATAT GATGGTATCC
CAGTCTGGTA AAGGCGGAAA GCCAGAACCA ATGGAATAA
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| Protein sequence | MLAQQPVIIL KQNVERTQGY EAQRSNIAAA KALAEAVRST LGPRGMDKML IDGTGDVTIT
NDGITILDEI SVQHPGAKMV IEVSRTQDEE VGDGTTTAVI LVGSLMEQAE SLLNKKIHPT
VICRGYRMGM LKALEILQSM ASKTDAYNKD VMKKIVQTAI TGKSIEDVKD KISDISVEAV
MKVATKDGNK VTVNEDDVKI KKHTGGTMDD AELIMGCVID KTRVNQEMPK RVINAKVAIV
QKELEIKKTE VKSKIKISST EQVEAFAEQE RSALKEMADA VAKTGANVLL CQKGIADAAQ
FYLAKAGILA IEDVPEADLK FAARSLGATI VTKAEDLKKS DLGVAEKAEQ LDDADMVVIT
GAKNPKTVTI LLRGSTYYLV DELERAVVDA TRVVMDAMED GLFVPGGGAV ESELTVRLRD
YAVNVGGREQ IAIEAYADAF AAIPITLAEN SGYNPIDKLV ELKKAHAEGK KNFGLNVYTG
KLVDMQKEGV IEPIRCKRQA IQSSEEAVEM LLRVDDMMVS QSGKGGKPEP ME
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