| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0441 |
|---|
| Symbol | |
|---|
| ID | 3924668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 514734 |
|---|
| End bp | 515528 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637896080 |
|---|
| Product | exodeoxyribonuclease III (xth) |
|---|
| Protein accession | YP_501922 |
|---|
| Protein GI | 88601744 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0708] Exonuclease III |
|---|
| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAT ACACCCTCTA TTCCTGGAAT GTGAATGGTC TCAGGGCTAT AAGTAGTAAA
GAGGTACTCC CCGGAGTTCT GTTCCCCGGA CTGCCGGCCC ATGAGAATAT AGACATCCTC
TGTATACAGG AGACAAAGGC AGATGCCCAT TCATTAAAGC CTGATATCAC CCGTATCCCT
GATTATTTCT TCTACATCAA TCCTGCTGAA CGGAAAGGAT ACAGCGGGGT TGCGATGTAC
TCCAGGACCG AGCCGGAATC AATAGAACTG GGAGGGCTAT CTCCCGAGTT TGATTCTGAA
GGTCGAATTA TTACCGCCCG GTTCCCTGAG TTTGTTCTGA TGAATGTCTA CTTCCCGAAC
GGCGGAGCAT CTGATGAACG ACTTGCATTC AAACTCAGAT TCTATGATGC ATTTTTAGAG
AAAATCAAGA CCATGGATGC CGCCGGAGAG CGTATCATCT TCTGTGGTGA CGTCAATACC
GCCCATAAAC CCATCGACCT TGCACGGCCC AAAGAGAATG AACTGGTATC AGGGTTTCTT
CCCATAGAGC GGGAGTGGAT TGACCGGGTT ATCGCTGCCG GATTTTATGA CAGTTTCAGG
CTGTTTTCTG ATGAAGGGAA CCAGTACAGC TGGTGGGACT ATAAGAGCAG GGCACGGACA
CGGAATGTCG GCTGGAGAAT AGATTATTTC TTCGTCAATA CTGCGGCAAA ACCATTCATT
ACCGGTGCAG GAATCAGAAA TGATATCATG GGCTCAGATC ACTGCCCGGT GACCCTTACC
CTTGAGTTCC CATAA
|
|---|
| Protein sequence | MKTYTLYSWN VNGLRAISSK EVLPGVLFPG LPAHENIDIL CIQETKADAH SLKPDITRIP
DYFFYINPAE RKGYSGVAMY SRTEPESIEL GGLSPEFDSE GRIITARFPE FVLMNVYFPN
GGASDERLAF KLRFYDAFLE KIKTMDAAGE RIIFCGDVNT AHKPIDLARP KENELVSGFL
PIEREWIDRV IAAGFYDSFR LFSDEGNQYS WWDYKSRART RNVGWRIDYF FVNTAAKPFI
TGAGIRNDIM GSDHCPVTLT LEFP
|
|---|
| |