| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_0011 |
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| Symbol | |
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| ID | 3923931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | + |
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| Start bp | 17422 |
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| End bp | 20331 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637895660 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_501511 |
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| Protein GI | 88601333 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.161167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCC AGGAGAGTGA CATTGCAACC AGTTCACGTA TCCTGGAATT ATTATCCGAC
GCTCCACAGG GAGCCAGTAT CGGGGAGATA TCATCTGCCC TCAACATGAA CCGGAACCTG
GTTGCAAAAT ATCTGTCCAT TCTTCACATG CAGGGCAGGG TTGAACTGCG ATCCTATGGA
AAAGTGAAGC TTTACAAAAA AACGACGAGA ATACCATTCC ATGCCCTTTC ACTGATTACC
CGTGGCTGTG TCATCGGTCT TGACCAGCTG TTGTATGTCA AGGAGGTTTT AGGCTATTGC
AGGGAAATGA CCGGATCAGA TAAGAATGAA TTATTATCAA AACCATTTTC AGAAATATTT
CATCCGGCAT TTACCAATCC TGTTGTAAAA AAATACATAC AGGAATATCG GAATGGAGCA
GTCGCACCCC CTCTTTATAA AGAGATATCC TGGCGTAAAC GAGGATTTGA TCTCACCGTT
GTTCCCTGTA TATTTGATGA TGGGACACAG GGGCTTGCAC TTATCCTTGC CGAACAGGCA
AACAATGCAC CCTCCCATAA AAAAGAGAAG AGCCACATCA GAACCTACCA GTACCTGACT
CGCGAGACGC CGAACTTTAT CCTTCATCTG AACGCCGAGG GAGATGTTCT GTATGTCAAT
GAATCGTATG CCACTTATTG CAATGCACGG GCGTCAGATC TTCTGCACAC GAATGGCATC
CCTCTAGCCA CCCAGGATGA TTTTACCCGA ATCAAAGAGG ATGTTTTAAA AAACTGGTCT
TTGAATGAAC CGACAGTCAG CGATATTCAG GTCGTGATGA ATGACGGATC TGTGCGATGG
CAGACCTGGG TATTTCATCC GGTCAGAGAA CAGGGCATCC TGACTGAACT TCACGGATAT
GGCAGAGATA TCACCGATGA GCGTGAAAGA GAGAATCTCT ACCTGCGACT CCAAAAAGAG
TTTAATCAGG ATGTCCAGGA GAAAACATCT GAACTTCGTG AGATAACGGC CCAACTCAGG
AAAGAGATTG ACGAGCGAAA GTCACTTGAA CTGGCACTGA AAAGAAGTGA AGAAAAATAC
CGGAACCTGA CTGAGATTAC CACCGACATA ATCTGGGAAA CAGATCTCTT TGGAACAATC
GTATACATCA ATCCAAAAGC AACATCCATC CTGGGGTATT CTCCCGAAGA ATTAGTCGGG
AAAAAAATCT GGAGTAAAAT TAATCCGGAT TACCGGAATC ATATCGAGCA CTATTTTTCA
GGGGCTAAAT GTTCGCCATT TGAACAGATT GCATTCCCTA TGACCCGATC TGACGGATTA
GAAGTATGGA TTGAATTTTC CGGCATACCA CTGTTTAATG ATGAACATCA GTTCTCCGGG
TATCGGGGGA TCGGCAGGGA TATTACCAAA TCAAAATTGA TTGAAGAGCA TAATCAAAGG
CTTCGTGCCA TAATAGAAAA TACTCCAGAT ATTGTCAGAA TTTCAGATAT TCATGGAGAT
CTCCTCTATA TGAATAAGGC AGGAAGAAAG ATCCTGAAAA TACCTGAAAC CGAGGATATC
ACCAGATATA ATAATGCCAG TTTCATGACT TCTGATGAAT GGACAAAGAT TCTTGAAGGT
CGGAGTATTG CCATCAGGGA GGGGATATGG CAGGGACTGA CCAGACTTAT CGCAACGGAT
GGAACCATCA TCCCGGTATC GCAAGTAATC ATCGCTCATA AGCAAGGCAA AGGAGAAGAG
ATGCTCTTCT CCACAGTAGC CCGGGACATA TCAGACATAA CCAAATTCAG ACAGGAACTT
GAAGATGCCA GCGTCTATAG CAGGAATCTC ATTGAAGTAA ACCTTGATCC ACTCGTGACC
ATCGGTCCTG ATGGTAAGAT TCAGGATGTC AATCACGCAA CCGAGATGGC AACAGGATTT
TCTCGCGAGA AACTTATCGG AACAGACTTC TGCTCGTACT TTTCGGACCC GGTGATGGCA
AGGGAGGGAT ATGAACGTGT TTTCTTACAA GGGTATGTCA GGGATTATCC GCTTGAAATT
ATCCATAAAG ATGGTCATAG CACTCCGGTC CTATACAATG CTTCAGTATA CCGGGATAAA
AACGGAAATA TACAGGGAGT ATTCGCAGCA GCACGTGATA TCACAGAGAT CGTAAAATTC
CAGAAAAAAC TGGAAGAGTC TCATAATTAC ACACGAAATT TGATAGAGGC ATCCCTTGAC
CCTCTGGTGA CCATCGGTCA GGATGGAAAG ATTCAGGATG TCAATCATGC AACCGAGATG
GTCACCGGAT ATGCCAGGGA GAACCTTATC GGAACGGATT TCTGCGCATA CTTTAAAGAC
CCCAAAAAAG CAAGGGAGGG ATATGAACGT GTTTTCTCAC AAGGGTATGT CAGGGATTAT
CCGCTTGAAA TTATTCATAA AGATGGTCAT AGCACTCCGG TCCTATACAA CGCTTCAGTA
TACCGGGATA AAAACGGAAA TATACAGGGA GTATTCGCAG CAGCACGTGA TATCACTGCC
CTGCTGGAAA GTGAATTCAC ACTTGCAGCC TCACGGGATT ATTACCTGAA GATCCTGGAT
GAATTTCCTA ATCCAATATG GCGCTCCGGG CCTGATGCAA AATGTAATTA CTTCAACAAA
GCATGGTTGA AATTTACCGG GAGGACTCTG GAAGAGGAAT ATGATGACGG ATGGGCAACC
GGAGTTCACC CGGATGATCT TGATCGGTGC ATATCACAAT ACCTCTCTTC ATTTGATAAA
AGAATCCCAT TTTATATACA ATACCGGCTC CGCCACCATG ATGGCTCATA TCACCGGATT
GCCGACTATG GCGCCCCCAT CTATGATCTG AAGGGAGAAT TTACCGGATA CATCGGATCA
TGTTATGACC TGGACAAGGA GGAACCATGA
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| Protein sequence | MPSQESDIAT SSRILELLSD APQGASIGEI SSALNMNRNL VAKYLSILHM QGRVELRSYG
KVKLYKKTTR IPFHALSLIT RGCVIGLDQL LYVKEVLGYC REMTGSDKNE LLSKPFSEIF
HPAFTNPVVK KYIQEYRNGA VAPPLYKEIS WRKRGFDLTV VPCIFDDGTQ GLALILAEQA
NNAPSHKKEK SHIRTYQYLT RETPNFILHL NAEGDVLYVN ESYATYCNAR ASDLLHTNGI
PLATQDDFTR IKEDVLKNWS LNEPTVSDIQ VVMNDGSVRW QTWVFHPVRE QGILTELHGY
GRDITDERER ENLYLRLQKE FNQDVQEKTS ELREITAQLR KEIDERKSLE LALKRSEEKY
RNLTEITTDI IWETDLFGTI VYINPKATSI LGYSPEELVG KKIWSKINPD YRNHIEHYFS
GAKCSPFEQI AFPMTRSDGL EVWIEFSGIP LFNDEHQFSG YRGIGRDITK SKLIEEHNQR
LRAIIENTPD IVRISDIHGD LLYMNKAGRK ILKIPETEDI TRYNNASFMT SDEWTKILEG
RSIAIREGIW QGLTRLIATD GTIIPVSQVI IAHKQGKGEE MLFSTVARDI SDITKFRQEL
EDASVYSRNL IEVNLDPLVT IGPDGKIQDV NHATEMATGF SREKLIGTDF CSYFSDPVMA
REGYERVFLQ GYVRDYPLEI IHKDGHSTPV LYNASVYRDK NGNIQGVFAA ARDITEIVKF
QKKLEESHNY TRNLIEASLD PLVTIGQDGK IQDVNHATEM VTGYARENLI GTDFCAYFKD
PKKAREGYER VFSQGYVRDY PLEIIHKDGH STPVLYNASV YRDKNGNIQG VFAAARDITA
LLESEFTLAA SRDYYLKILD EFPNPIWRSG PDAKCNYFNK AWLKFTGRTL EEEYDDGWAT
GVHPDDLDRC ISQYLSSFDK RIPFYIQYRL RHHDGSYHRI ADYGAPIYDL KGEFTGYIGS
CYDLDKEEP
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