Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3035 |
Symbol | |
ID | 3916647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 3247022 |
End bp | 3249055 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640445815 |
Product | sulfotransferase |
Protein accession | YP_498304 |
Protein GI | 87201047 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.530133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCCAAC AACTTCGCCC GCCGCCCTCG CCAGCCGCCG CCCTGGCCGA GGCGGAGCAG TTGCTCGCCA CCCGCCCCCA CCTCGCGCTG ACCCGCGCCG AAGCGATGCT GCGGCAGGTC CCCGCCCATC CCCCCGCCCT GTTCCTCGCC GCCCGCGCCC TGCGCCGGAT GGGCAGGCAG CGCGAGGCGC TGGACCGGCT CGATGCGCTG GCAAAGGCAA ATCCCCGCGT ACCGGCGGTC CTCTACGAAC TCGGGCAGGT GGCGGCGGAC CTTGGCGACC AGCGGCGCGC AACCGCCGCG CTCCAGGCGC TTGTCCGCCT TCAGCCCGCC ATTGCCTCGG GCTGGTTCCT GCTCGCCAGG CAACTGCGCA AGGCCGGGCA AGAGGAGGAC GCATGGCGTG CCGACCTTTC CGGCATCCAC GCCTCCTCGC GCGATGGCGA ACTGCTGAAG GCGGCGGCGG CGATGAACGA CGGCGAAACC GATGCCGCCG AAGCCCTGCT GAATGCGCGA CTGGAACGGC AGGCGGACGA TGCCCCCGCC TTGCGCCTCC TCGGTGAAAT CGCATGGCGG CGCGGCGACA TGACCACGGC GCTCGACCGC GCGGCGCGGG CGGTCGATCT GGCGCCGGGG TTCGACCTTG CCCGCGACTT CCTGATCCGC CTCCTGCTCC AGACCAACCG CCTGTCCGAA GCGCTCGACC ATGCCGAGAC GCTGGTGCGC TCGCCCGTTC CGTCACCGGG GCACAGGCTG ATCCTTGCCT CGGTCCTCGT CCGCCTCGGC CACCAGGAGC GCGCGGCAGC GATCTATCGA GAGCTTCTGG CCGAACGGCC CGACGAGCCG CAGGTCTGGC AGAACCTCGG CCACGTGCTG AAGACGCTGG GCCACCAGGA CGAGGCGGTC GAGGCCTATC GCGCCGCCGT CTCGCGTCAA CCGACCATGG GTGAAGCGTG GTGGAGCCTT GCCAACCTCA AGACGGTCCG CCTGGGCGCC GAAGACGTCG CGGCAATGGA AGCGGCGCTG GCCTCGCTCG ACGATGCGGT GGATGAGCGC AAGGACGACG TATTCCACCT CCATTTTTCG CTGGGCAAGG CATTCGAGGA CACCGGCGAT CATGCCGCCG CCTTTGCCCA TTACGACAAG GGCAATGCCT TGCGTCGTAC CATGATCCGC CACGATGCCG ATGCCTTTTC GGCCCAGGTG GACGCTACGG CAGCGACCTT CACTGCCGCG TTCCTTGCGG GCATGGGAGA AGGCGGTTGC CCCGCGCCCG ACCCGATCTT CGTCGTCGGC CTGCCCCGGT CGGGCTCGAC CCTGGTCGAA CAGATCCTGT CCAGCCACAG CCAGGTCGAA GGCACGATGG AACTGCCCGA GATGATGATG ATCGCCGCGC GCCTGCAATC GCGCGTCGAC GAGGGCGAAT TTCCGGATTT CGCCGCGATG GTCGCCTCGC TGTCGCCCGC CGACCGCGCC AGGCTCGGTG ACGAATACAT CGAGCGCACC CGCATTCATC GCCAGACCGA CCGGCCCCTG TTCATCGACA AGATGCCCAA CAACTGGCAG CACGTCGGCC TGATCCGGCT GATCCTGCCG AACGCCAACG TGATCGACGC GCGAAGGCAT CCGCTGTCCT GCTGCTTTTC CGGGTGGAAA CAGCATTTCG CGCGCGGCCA GACCTTCACC TACGACCTTG CCGACATCGG TCGCTACTAT CGCGATTACG TCGGCCTGAT GGCAGCGTGG GACGCCCATT TTCCCGGTGC GGTCCACCGC GTGATCTACG AACGGATGGT GGCGGATACC GAAAACGAGG TCCGCCGCCT GCTCGACCAT CTCGGCCTGC CGTTCGAACC GGCCTGCCTG GAATTCTACC GCAACGAGCG CGCAGTGCGC ACGGCCAGTT CCGAACAGGT GCGGAAGCCG ATCTTCCGCG ACGGACTCGA AGCGTGGAAA CCCTATGAAC CCTGGCTCGC CCCCCTGAAG GCCGCACTTG GCCCCGTGCT GGACAGCTAT CCCGACGCGC CCTCCGCACG CTGA
|
Protein sequence | MVQQLRPPPS PAAALAEAEQ LLATRPHLAL TRAEAMLRQV PAHPPALFLA ARALRRMGRQ REALDRLDAL AKANPRVPAV LYELGQVAAD LGDQRRATAA LQALVRLQPA IASGWFLLAR QLRKAGQEED AWRADLSGIH ASSRDGELLK AAAAMNDGET DAAEALLNAR LERQADDAPA LRLLGEIAWR RGDMTTALDR AARAVDLAPG FDLARDFLIR LLLQTNRLSE ALDHAETLVR SPVPSPGHRL ILASVLVRLG HQERAAAIYR ELLAERPDEP QVWQNLGHVL KTLGHQDEAV EAYRAAVSRQ PTMGEAWWSL ANLKTVRLGA EDVAAMEAAL ASLDDAVDER KDDVFHLHFS LGKAFEDTGD HAAAFAHYDK GNALRRTMIR HDADAFSAQV DATAATFTAA FLAGMGEGGC PAPDPIFVVG LPRSGSTLVE QILSSHSQVE GTMELPEMMM IAARLQSRVD EGEFPDFAAM VASLSPADRA RLGDEYIERT RIHRQTDRPL FIDKMPNNWQ HVGLIRLILP NANVIDARRH PLSCCFSGWK QHFARGQTFT YDLADIGRYY RDYVGLMAAW DAHFPGAVHR VIYERMVADT ENEVRRLLDH LGLPFEPACL EFYRNERAVR TASSEQVRKP IFRDGLEAWK PYEPWLAPLK AALGPVLDSY PDAPSAR
|
| |