Gene Saro_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1941 
Symbol 
ID3917164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp2056549 
End bp2057178 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content67% 
IMG OID640444687 
Productthymidylate kinase 
Protein accessionYP_497215 
Protein GI87199958 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCGGG GACGTTTTGT TGCCTTCGAG GGGGGCGAGG GCGTCGGCAA GTCGACGCAG 
GGACGGCTTC TGGCGGAGTC GCTGCGTGCG CGAGGGCTGG AAGTGGTGAC CACGCGTGAA 
CCTGGGGGGA CCGCCGGCGC GGAAGCAATC CGCACGATGC TGTTGAGCAC CGAAGGCGAA 
GGTTGGGGCG CTCGGGCGGA GGCGTTGCTG TTCGCAGCGG CGCGTGCCGA CCATGTCGAG 
AAGCTGATCC GGCCATCGGT AGCGCGTGGC GCCTGGGTTG TGTGCGACCG ATTCGTCGAC 
AGCAGTCGAG CCTACCAGGG CGGTGGTAGC GGTCTTTCGG ATGCGGATGT GATGCAACTC 
CACAGGATCG GCAGCGCGGG GCTCTTGCCG GACGTGACGA TCCTTCTGAC CGTACGGCCA 
GAAATCTCGG CTGCGAGGCT GGCCATGCGC GATGGCAATG CGGCGGACCG CATCGGCGGG 
CGCGGCGAAG AGTACCATGG ACGTGTGGCG GCGGCCTTCC GGCGGTTCGC CGAGCAGGAA 
CCCGACCGGT TCGCCGTTGT CGACGCTGAA GGATCGCCGG AAGAAGTTCA TGCCCGGGTC 
ACTGCGGCCA TCGACAAGGC GTTGGCATGA
 
Protein sequence
MSRGRFVAFE GGEGVGKSTQ GRLLAESLRA RGLEVVTTRE PGGTAGAEAI RTMLLSTEGE 
GWGARAEALL FAAARADHVE KLIRPSVARG AWVVCDRFVD SSRAYQGGGS GLSDADVMQL 
HRIGSAGLLP DVTILLTVRP EISAARLAMR DGNAADRIGG RGEEYHGRVA AAFRRFAEQE 
PDRFAVVDAE GSPEEVHARV TAAIDKALA