| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1890 |
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| Symbol | |
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| ID | 3917111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 1999508 |
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| End bp | 2001337 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640444634 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_497164 |
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| Protein GI | 87199907 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGGA TATCCCTGAT TTCCGCGCTC GCTCTGGTCC TGTCCTTGGG GCAGCCGGCG
TTGGCCGACG TGCCACTGGC CGAAGTGCGT GCGCGTCCCG CTGCAGGCGA AGTGGTCTAT
TTCCTGCTGC CCGACCGGTT CGATAACGGC GACAGGAAGA ACGACCTTGG CGGGCTCAAG
GGCGATCGGC TGAAGACCGG GTTCGACCCG TCGGCAAAGG GGTTTTATCA CGGCGGGGAC
ATCAAGGGCC TGCTCTCGCG GCTCGACTAC CTCCAGGACA TGGGCGTGAC GGCGCTGTGG
GTGGCGCCGG TGTTCCGCAA CAAGCCGGTA CAGGGCGCGC CCGGGCAGGA GAGCGCGGGG
TATCACGGAT ACTGGGTAAC CGATTTCACC CGGATCGATC CGCACTTCGG CAGCAATGCC
GATTTCAAGG CGCTGGTCGA CGCTGCCCAT GCTCGCGGCA TCAAGGTCTA CATGGACATC
ATCGCCAATC ACACGGCGGA CGTGATCCAC TATGCCGATG GCGATTACTC ATACCGCAAC
CGGGCCGACT GGCCCTATTC GCGCAAGGGT GGATTGTCCG GCAAGGCGAT CAACCAGGGG
TTTGCGGGCG ACGAGGACTC GAGCGCGGCG AACTTTGCGA AGCTGACCGA TCCCGGCGCG
GCATATCAGC CGTTGATCGA CCCGGCCGAG CGAAACGTGA AGGTCCCGGC CTGGCTGAAC
GATCCGATCT ACTACCATAA TCGCGGCAAC ACGACGTTCA CCGGCGAGGA CAGCCGGTTC
GGGGACTTTG CCGGACTGGA CGACCTGTTC ACCGAACATC CCCGCGTTCG TGCCGGGATG
GTTGAGATCT ATGCCGACTG GATCCGCAGG TTCGGCATCG ACGGCTACCG CGTCGATACG
GCCAAGCATG TCGATCCGGG CTTCTGGCAA GTGTTCACTC CGGAAATTCG CAAGGTCGCG
GCAGAGGCCG GCATACCGAA TTTCGCGGTG TTCGCTGAAA TCGCCAACGG CGGCTCGGAC
CCCGGCACGA TCGCGCGACA CACCCGCCGC GACGGCTTTC CGCAAGTGCT CGACTTCGCG
TTCCAGGAAG CGGTGCGGGA CCTTGTCGGC AAGGGTAAGG CGACGCGCGT GCTGGCAGAG
ACCTTTGACG GCGACGTACT CTATGAAGGT GGCGAGGCGG CGGCGCTCGC CATGCCAACT
TTCCTCGGCA ACCACGACAT GGGCCGTTTC TCGACCGCAG TCCGGCAGGA CCGCCCGGGC
ATTTCCGACA AGGAACTGCT CGACCGCGTC GCGCTGGCGC ACGTCATGCT GATGACCCTT
CGCGGTTCGC CGGTGATCTA CTACGGCGAC GAGCAGGGCT TTGTCGGCGA CGGCGGCGAC
CAGGACGCGC GCGAGGACAT GTTCCCGAGC CGCACGGCCA GCTACAACGA CAATCGCCTG
ATCGGGACGG CCAGCACGAC GGCTGCCGAC AATTTCGACG AGGGGCATCC CCTCTATCGG
CTGATCCGCG ATCTTGCCGT ACTGCGGAAG GCGCATCCCG CGCTGGCCCG GGGGCGGCAG
GTTACGCGAA CGTATTCGGA AGGGCCCGGA CTGTTTTCCG TCTCCCGCTT CGATCCGGAG
ACGGGTACGG AATACCTGAT AGCGTTCAAC ACATCGGACA AGCCACTTCG TGCAACCAGC
GTGATTGGCG CGTCGGCAAG CGGTCTCGAA GGGCTCTACG GCCAATGTCC GTTATCGGTG
GCGGCGCCGG GTTCGGTGCT GCTCGATCTC CCCGCATTTG GCAGCGTCGT CTGTCGTGTC
ATCCTCTCCC CGGAATCCAG CGTTCGATGA
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| Protein sequence | MRRISLISAL ALVLSLGQPA LADVPLAEVR ARPAAGEVVY FLLPDRFDNG DRKNDLGGLK
GDRLKTGFDP SAKGFYHGGD IKGLLSRLDY LQDMGVTALW VAPVFRNKPV QGAPGQESAG
YHGYWVTDFT RIDPHFGSNA DFKALVDAAH ARGIKVYMDI IANHTADVIH YADGDYSYRN
RADWPYSRKG GLSGKAINQG FAGDEDSSAA NFAKLTDPGA AYQPLIDPAE RNVKVPAWLN
DPIYYHNRGN TTFTGEDSRF GDFAGLDDLF TEHPRVRAGM VEIYADWIRR FGIDGYRVDT
AKHVDPGFWQ VFTPEIRKVA AEAGIPNFAV FAEIANGGSD PGTIARHTRR DGFPQVLDFA
FQEAVRDLVG KGKATRVLAE TFDGDVLYEG GEAAALAMPT FLGNHDMGRF STAVRQDRPG
ISDKELLDRV ALAHVMLMTL RGSPVIYYGD EQGFVGDGGD QDAREDMFPS RTASYNDNRL
IGTASTTAAD NFDEGHPLYR LIRDLAVLRK AHPALARGRQ VTRTYSEGPG LFSVSRFDPE
TGTEYLIAFN TSDKPLRATS VIGASASGLE GLYGQCPLSV AAPGSVLLDL PAFGSVVCRV
ILSPESSVR
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